Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22p14
         (319 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   1.2  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   1.2  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   1.2  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   1.2  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   2.7  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   2.7  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    21   2.7  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   2.7  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   2.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   4.7  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 218 LSQQWQEPRGRINXQCXYD 274
           L QQW +PR R + +  Y+
Sbjct: 113 LQQQWYDPRLRYSNRSQYE 131


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 218 LSQQWQEPRGRINXQCXYD 274
           L QQW +PR R + +  Y+
Sbjct: 113 LQQQWYDPRLRYSNRSQYE 131


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 218 LSQQWQEPRGRINXQCXYD 274
           L QQW +PR R + +  Y+
Sbjct: 164 LQQQWYDPRLRYSNRSQYE 182


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 1.2
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 218 LSQQWQEPRGRINXQCXYD 274
           L QQW +PR R + +  Y+
Sbjct: 113 LQQQWYDPRLRYSNRSQYE 131


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 207 NSRTCHNNGRNLVDVLTYNV 266
           +++T HNN  N   +  YN+
Sbjct: 86  SNKTIHNNNNNYKKLQYYNI 105


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 207 NSRTCHNNGRNLVDVLTYNV 266
           +++T HNN  N   +  YN+
Sbjct: 86  SNKTIHNNNNNYKKLQYYNI 105


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 207 NSRTCHNNGRNLVDVLTYNV 266
           +++T HNN  N   +  YN+
Sbjct: 86  SNKTIHNNNNNYKKLQYYNI 105


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 207 NSRTCHNNGRNLVDVLTYNV 266
           +++T HNN  N   +  YN+
Sbjct: 86  SNKTIHNNNNNYKKLQYYNI 105


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.4 bits (43), Expect = 2.7
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 207 NSRTCHNNGRNLVDVLTYNV 266
           +++T HNN  N   +  YN+
Sbjct: 319 SNKTIHNNNNNYKKLQYYNI 338


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 4.7
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -2

Query: 234 CHCCD 220
           CHCCD
Sbjct: 747 CHCCD 751


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,969
Number of Sequences: 438
Number of extensions: 940
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6844365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)