Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt22p04
(696 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF175265-1|AAF89953.1| 796|Homo sapiens vacuolar sorting protei... 300 3e-81
BC093036-1|AAH93036.1| 796|Homo sapiens vacuolar protein sortin... 297 3e-80
BC010362-1|AAH10362.1| 796|Homo sapiens vacuolar protein sortin... 297 3e-80
BC002414-1|AAH02414.1| 796|Homo sapiens vacuolar protein sortin... 297 3e-80
AK223218-1|BAD96938.1| 796|Homo sapiens vacuolar protein sortin... 297 3e-80
AK001614-1|BAA91790.1| 796|Homo sapiens protein ( Homo sapiens ... 297 3e-80
AF191298-1|AAF02778.2| 796|Homo sapiens vacuolar sorting protei... 297 3e-80
AF186382-1|AAG40619.1| 796|Homo sapiens vacuolar protein sortin... 297 3e-80
AF183418-1|AAG09687.1| 796|Homo sapiens maternal-embryonic 3 pr... 297 3e-80
AK023650-1|BAB14626.1| 661|Homo sapiens protein ( Homo sapiens ... 99 7e-21
AB209625-1|BAD92862.1| 459|Homo sapiens dynactin 1 isoform 1 va... 31 5.2
BX537867-1|CAD97869.1| 972|Homo sapiens hypothetical protein pr... 30 9.1
BC058845-1|AAH58845.1| 963|Homo sapiens esophageal cancer assoc... 30 9.1
BC050464-1|AAH50464.1| 963|Homo sapiens esophageal cancer assoc... 30 9.1
BC014900-1|AAH14900.2| 869|Homo sapiens MGC16824 protein protein. 30 9.1
AK131454-1|BAD18599.1| 945|Homo sapiens protein ( Homo sapiens ... 30 9.1
AK024693-1|BAB14965.1| 824|Homo sapiens protein ( Homo sapiens ... 30 9.1
>AF175265-1|AAF89953.1| 796|Homo sapiens vacuolar sorting protein
35 protein.
Length = 796
Score = 300 bits (736), Expect = 3e-81
Identities = 143/193 (74%), Positives = 162/193 (83%), Gaps = 1/193 (0%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTHEAPN-ENEGTVRDAVDF 655
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD E P+ E G + D++DF
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPPDEETTGDISDSMDF 182
Query: 656 VLMNFAEMNKLWV 694
VL+NFAEMNKLWV
Sbjct: 183 VLLNFAEMNKLWV 195
>BC093036-1|AAH93036.1| 796|Homo sapiens vacuolar protein sorting
35 homolog (S. cerevisiae) protein.
Length = 796
Score = 297 bits (728), Expect = 3e-80
Identities = 142/193 (73%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTHE-APNENEGTVRDAVDF 655
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD E E G + D++DF
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDF 182
Query: 656 VLMNFAEMNKLWV 694
VL+NFAEMNKLWV
Sbjct: 183 VLLNFAEMNKLWV 195
>BC010362-1|AAH10362.1| 796|Homo sapiens vacuolar protein sorting
35 homolog (S. cerevisiae) protein.
Length = 796
Score = 297 bits (728), Expect = 3e-80
Identities = 142/193 (73%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTHE-APNENEGTVRDAVDF 655
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD E E G + D++DF
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDF 182
Query: 656 VLMNFAEMNKLWV 694
VL+NFAEMNKLWV
Sbjct: 183 VLLNFAEMNKLWV 195
>BC002414-1|AAH02414.1| 796|Homo sapiens vacuolar protein sorting
35 homolog (S. cerevisiae) protein.
Length = 796
Score = 297 bits (728), Expect = 3e-80
Identities = 142/193 (73%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTHE-APNENEGTVRDAVDF 655
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD E E G + D++DF
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDF 182
Query: 656 VLMNFAEMNKLWV 694
VL+NFAEMNKLWV
Sbjct: 183 VLLNFAEMNKLWV 195
>AK223218-1|BAD96938.1| 796|Homo sapiens vacuolar protein sorting
35 variant protein.
Length = 796
Score = 297 bits (728), Expect = 3e-80
Identities = 142/193 (73%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTHE-APNENEGTVRDAVDF 655
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD E E G + D++DF
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDF 182
Query: 656 VLMNFAEMNKLWV 694
VL+NFAEMNKLWV
Sbjct: 183 VLLNFAEMNKLWV 195
>AK001614-1|BAA91790.1| 796|Homo sapiens protein ( Homo sapiens
cDNA FLJ10752 fis, clone NT2RP3004480, weakly similar to
VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS35. ).
Length = 796
Score = 297 bits (728), Expect = 3e-80
Identities = 142/193 (73%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTHE-APNENEGTVRDAVDF 655
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD E E G + D++DF
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDF 182
Query: 656 VLMNFAEMNKLWV 694
VL+NFAEMNKLWV
Sbjct: 183 VLLNFAEMNKLWV 195
>AF191298-1|AAF02778.2| 796|Homo sapiens vacuolar sorting protein
35 protein.
Length = 796
Score = 297 bits (728), Expect = 3e-80
Identities = 142/193 (73%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTHE-APNENEGTVRDAVDF 655
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD E E G + D++DF
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDF 182
Query: 656 VLMNFAEMNKLWV 694
VL+NFAEMNKLWV
Sbjct: 183 VLLNFAEMNKLWV 195
>AF186382-1|AAG40619.1| 796|Homo sapiens vacuolar protein sorting
35 protein.
Length = 796
Score = 297 bits (728), Expect = 3e-80
Identities = 142/193 (73%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTHE-APNENEGTVRDAVDF 655
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD E E G + D++DF
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDF 182
Query: 656 VLMNFAEMNKLWV 694
VL+NFAEMNKLWV
Sbjct: 183 VLLNFAEMNKLWV 195
>AF183418-1|AAG09687.1| 796|Homo sapiens maternal-embryonic 3
protein.
Length = 796
Score = 297 bits (728), Expect = 3e-80
Identities = 142/193 (73%), Positives = 160/193 (82%), Gaps = 1/193 (0%)
Frame = +2
Query: 119 TNQVSPVEEQEKLLEEALNIVKVQAFQMKRCLDKSKLMDALKHASTMLGELRTSLLSPKS 298
T Q SP +EQEKLL+EA+ VKVQ+FQMKRCLDK+KLMDALKHAS MLGELRTS+LSPKS
Sbjct: 3 TTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKS 62
Query: 299 YYELYMAITDXXXXXXXXXXXXFQKGRKVADLYELVQYAGNIVPRLYLLITVGLVYIKTN 478
YYELYMAI+D F KGRKVADLYELVQYAGNI+PRLYLLITVG+VY+K+
Sbjct: 63 YYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSF 122
Query: 479 TNLRRDLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRNVLPDTHE-APNENEGTVRDAVDF 655
R+D+LKDLVEMCRGVQHPLRGLFLRNYLLQCTRN+LPD E E G + D++DF
Sbjct: 123 PQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDF 182
Query: 656 VLMNFAEMNKLWV 694
VL+NFAEMNKLWV
Sbjct: 183 VLLNFAEMNKLWV 195
>AK023650-1|BAB14626.1| 661|Homo sapiens protein ( Homo sapiens
cDNA FLJ13588 fis, clone PLACE1009298, weakly similar to
VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS35. ).
Length = 661
Score = 99 bits (238), Expect = 7e-21
Identities = 45/60 (75%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Frame = +2
Query: 518 MCRGVQHPLRGLFLRNYLLQCTRNVLPDTHE-APNENEGTVRDAVDFVLMNFAEMNKLWV 694
MCRGVQHPLRGLFLRNYLLQCTRN LPD E E G + D++DFVL+NFAEMNKLWV
Sbjct: 1 MCRGVQHPLRGLFLRNYLLQCTRNTLPDEGEPTDEETTGDISDSMDFVLLNFAEMNKLWV 60
>AB209625-1|BAD92862.1| 459|Homo sapiens dynactin 1 isoform 1
variant protein.
Length = 459
Score = 30.7 bits (66), Expect = 5.2
Identities = 14/42 (33%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +2
Query: 125 QVSPVEEQEKLLEEALNIV-KVQAFQMKRCLDKSKLMDALKH 247
+ SP++E+E L + ++ K++ ++KR DK+KL + KH
Sbjct: 35 EASPLQEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKH 76
>BX537867-1|CAD97869.1| 972|Homo sapiens hypothetical protein
protein.
Length = 972
Score = 29.9 bits (64), Expect = 9.1
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 422 IVPRLYLLITVGLVYIKTNTNLRR----DLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRN 589
++PR Y+ ++ +K N L + + L L M RG+ PL ++ R YL +
Sbjct: 299 LIPRFYVEASI----LKCNKFLSKTGISECLPRLTCMIRGIGDPLVSVYARAYLCRVGME 354
Query: 590 VLPDTHEAPNEN 625
V P E N+N
Sbjct: 355 VAPHLKETLNKN 366
>BC058845-1|AAH58845.1| 963|Homo sapiens esophageal cancer
associated protein protein.
Length = 963
Score = 29.9 bits (64), Expect = 9.1
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 422 IVPRLYLLITVGLVYIKTNTNLRR----DLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRN 589
++PR Y+ ++ +K N L + + L L M RG+ PL ++ R YL +
Sbjct: 290 LIPRFYVEASI----LKCNKFLSKTGISECLPRLTCMIRGIGDPLVSVYARAYLCRVGME 345
Query: 590 VLPDTHEAPNEN 625
V P E N+N
Sbjct: 346 VAPHLKETLNKN 357
>BC050464-1|AAH50464.1| 963|Homo sapiens esophageal cancer
associated protein protein.
Length = 963
Score = 29.9 bits (64), Expect = 9.1
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 422 IVPRLYLLITVGLVYIKTNTNLRR----DLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRN 589
++PR Y+ ++ +K N L + + L L M RG+ PL ++ R YL +
Sbjct: 290 LIPRFYVEASI----LKCNKFLSKTGISECLPRLTCMIRGIGDPLVSVYARAYLCRVGME 345
Query: 590 VLPDTHEAPNEN 625
V P E N+N
Sbjct: 346 VAPHLKETLNKN 357
>BC014900-1|AAH14900.2| 869|Homo sapiens MGC16824 protein protein.
Length = 869
Score = 29.9 bits (64), Expect = 9.1
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 422 IVPRLYLLITVGLVYIKTNTNLRR----DLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRN 589
++PR Y+ ++ +K N L + + L L M RG+ PL ++ R YL +
Sbjct: 196 LIPRFYVEASI----LKCNKFLSKTGISECLPRLTCMIRGIGDPLVSVYARAYLCRVGME 251
Query: 590 VLPDTHEAPNEN 625
V P E N+N
Sbjct: 252 VAPHLKETLNKN 263
>AK131454-1|BAD18599.1| 945|Homo sapiens protein ( Homo sapiens
cDNA FLJ16608 fis, clone TESTI4011070. ).
Length = 945
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +1
Query: 418 EHCT*IVPVNHSRTGLHQNKHESAKRSIEGSG*DVSRSSASFERTFP*ELPIAVHKE 588
E C ++P S T + +H+ ++ ++E S + S+S E FP E IA+ E
Sbjct: 245 EVCDSLIPSTSSMTHVSDTEHKESETAVETSTPKIKTGSSSLEGQFPNE-GIAIDME 300
>AK024693-1|BAB14965.1| 824|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21040 fis, clone CAE10642. ).
Length = 824
Score = 29.9 bits (64), Expect = 9.1
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +2
Query: 422 IVPRLYLLITVGLVYIKTNTNLRR----DLLKDLVEMCRGVQHPLRGLFLRNYLLQCTRN 589
++PR Y+ ++ +K N L + + L L M RG+ PL ++ R YL +
Sbjct: 151 LIPRFYVEASI----LKCNKFLSKTGISECLPRLTCMIRGIGDPLVSVYARAYLCRVGME 206
Query: 590 VLPDTHEAPNEN 625
V P E N+N
Sbjct: 207 VAPHLKETLNKN 218
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,724,370
Number of Sequences: 237096
Number of extensions: 2566841
Number of successful extensions: 9263
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 8998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9253
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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