Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22o23
         (578 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    36   2e-04
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    36   2e-04
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    23   2.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   6.7  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   8.8  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    21   8.8  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   8.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   8.8  

>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 36.3 bits (80), Expect = 2e-04
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +3

Query: 132 CPENAHWT--DDPCAKTCDDPYLTNTVCIAALIPTCHCNSGLVFNAERKCVPISDC 293
           CP N  ++  D  C + C +  +   +CI    P C C  G + N ++ CVP S C
Sbjct: 37  CPSNEIFSRCDGRCQRFCPN-VVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 36.3 bits (80), Expect = 2e-04
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +3

Query: 132 CPENAHWT--DDPCAKTCDDPYLTNTVCIAALIPTCHCNSGLVFNAERKCVPISDC 293
           CP N  ++  D  C + C +  +   +CI    P C C  G + N ++ CVP S C
Sbjct: 37  CPSNEIFSRCDGRCQRFCPN-VVPKPLCIKICAPGCVCRLGYLRNKKKVCVPRSKC 91


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 238 QWQVGMRAAMQTVLVKYGSSQV 173
           +WQ   RAA+ T+L   G   V
Sbjct: 250 RWQYAARAAISTMLASMGGGLV 271


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 138 RDTHRQQCWHQESSGRQSGTR*SIVWRPSS*VSQYLFQTTTLE 10
           R T  Q C  + ++GR  G +     +  S V+QY+ +  T E
Sbjct: 491 RGTKMQFCIFRTANGRGWGVKTMKTIKKGSFVTQYVGEVITNE 533


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 221 EGGDANGVSQVWVVAGLRAGVISPMSILG 135
           +G + NG++      GL AG++  ++ LG
Sbjct: 116 DGDEENGLTSESTDPGLVAGIVIGVTSLG 144


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -1

Query: 221 EGGDANGVSQVWVVAGLRAGVISPMSILG 135
           +G + NG++      GL AG++  ++ LG
Sbjct: 87  DGDEENGLTSESTDPGLVAGIVIGVTSLG 115


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 269 SLRVED*AAVTVAGWNE 219
           SL +ED   +  AGWNE
Sbjct: 257 SLPLEDQVLLLRAGWNE 273


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -1

Query: 269 SLRVED*AAVTVAGWNE 219
           SL +ED   +  AGWNE
Sbjct: 257 SLPLEDQVLLLRAGWNE 273


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,026
Number of Sequences: 438
Number of extensions: 2946
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)