Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22o03
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.7  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.7  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   3.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   3.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.2  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 410 DGSPLWVIRSHHSGELIPGKLAIKHR 487
           DG P+ +    HSGE++ G   I HR
Sbjct: 504 DGEPVKITIGIHSGEVVTG--VIGHR 527


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 410 DGSPLWVIRSHHSGELIPGKLAIKHR 487
           DG P+ +    HSGE++ G   I HR
Sbjct: 504 DGEPVKITIGIHSGEVVTG--VIGHR 527


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 355 GR*LNPFNWV*IFDNSDW 302
           G+ + P NWV +F  S W
Sbjct: 156 GKRVPPTNWVGVFGGSAW 173


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +3

Query: 60  KISERISKQKCRTFHRMVPRLRRPMVIHPILEDSR 164
           + S++I   +CRT HR+  ++    V +  + D R
Sbjct: 199 EFSDQIHGYRCRTMHRLTRQVVVSSVANVRIADHR 233


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = +3

Query: 60  KISERISKQKCRTFHRMVPRLRRPMVIHPILEDSR 164
           + S++I   +CRT HR+  ++    V +  + D R
Sbjct: 199 EFSDQIHGYRCRTMHRLTRQVVVSSVANVRIADHR 233


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 355 GR*LNPFNWV*IFDNSDW 302
           G+ + P NWV +F  S W
Sbjct: 156 GKRVPPTNWVGVFGGSAW 173


>AF388659-1|AAK71995.1|  782|Apis mellifera
          1D-myo-inositol-trisphosphate 3-kinaseisoform A
          protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 51 CVSKISERISKQK 89
          CVS+IS RIS+ +
Sbjct: 32 CVSRISNRISRNR 44


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,904
Number of Sequences: 438
Number of extensions: 3895
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)