Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22n02
         (260 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    23   0.62 
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    23   0.62 
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    23   0.62 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   1.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   1.1  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   1.9  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   2.5  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    20   4.4  

>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 0.62
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 207 LYCNYYFKLYF 239
           LYCN Y KLY+
Sbjct: 99  LYCNNYKKLYY 109


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 0.62
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 207 LYCNYYFKLYF 239
           LYCN Y KLY+
Sbjct: 99  LYCNNYKKLYY 109


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 0.62
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 207 LYCNYYFKLYF 239
           LYCN Y KLY+
Sbjct: 99  LYCNNYRKLYY 109


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 221 IITVQVDHVHLHNNVIPKKRYSLVYNLFS 135
           ++ + V +   H+  +P K+Y  V  LFS
Sbjct: 387 VLPISVANELRHSRPVPAKKYDCVTLLFS 415


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 1.1
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 221 IITVQVDHVHLHNNVIPKKRYSLVYNLFS 135
           ++ + V +   H+  +P K+Y  V  LFS
Sbjct: 387 VLPISVANELRHSRPVPAKKYDCVTLLFS 415


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 212 VQVDHVHLHNNVIPKKRYSL 153
           V ++H+   NN I +KR+ L
Sbjct: 94  VYIEHLTKLNNAIEEKRFEL 113


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 204 YLYCNYYFKLYFFSIVK 254
           ++  NY+  LYF S+V+
Sbjct: 16  FILINYFIFLYFNSLVR 32


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.2 bits (40), Expect = 4.4
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = -2

Query: 175 YQKNDIVWFIIYLVECDIFSC 113
           ++K ++ WF +  V   +F C
Sbjct: 265 FEKLELKWFAVPAVSGMVFDC 285


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,406
Number of Sequences: 438
Number of extensions: 1041
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4762122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)