Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22m11
         (337 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   0.75 
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    20   9.2  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    20   9.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    20   9.2  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    20   9.2  
AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin prot...    20   9.2  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.4 bits (48), Expect = 0.75
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -2

Query: 90  TFSGAGPSKTLTSTALALA 34
           TF G GPSK L   A + A
Sbjct: 192 TFEGTGPSKKLAKAAASKA 210


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = +1

Query: 211 YEKNGIQYLKSY*IFNQSIISYXVPTTALL 300
           YE+N +QY  S  I N       V    +L
Sbjct: 291 YEENNVQYEGSQDILNTQSFGKVVSKNGVL 320


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 199 TQGLYEKNGIQY 234
           TQG ++ N IQY
Sbjct: 281 TQGKFQANDIQY 292


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 120 LALKQKEHAMXAL*KMEKRTVDHLLKNTR 206
           L  K+KE ++       K+T+D L  NT+
Sbjct: 80  LCEKRKEVSIITEDSSRKQTIDPLSSNTQ 108


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 279 STYDSIAYLSANQFQYEKK 335
           +T+D     + N F YEK+
Sbjct: 220 TTFDDYLDYAINPFDYEKR 238


>AB073995-1|BAC76399.1|  301|Apis mellifera preprotachykinin
           protein.
          Length = 301

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 279 STYDSIAYLSANQFQYEKK 335
           +T+D     + N F YEK+
Sbjct: 220 TTFDDYLDYAINPFDYEKR 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,122
Number of Sequences: 438
Number of extensions: 1347
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)