Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt22k22
(650 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 25 0.84
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 23 1.9
DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 22 5.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.8
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 24.6 bits (51), Expect = 0.84
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -1
Query: 332 VAFVKFEVNFFDVSRHILVCVRFYINSPLMCVSILF 225
V F+ + F V+ +ILVCV Y + L + LF
Sbjct: 28 VGFLFLILIFLSVAGNILVCVAIYTDRGLRRIGNLF 63
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 30 FHSVRRIAIYFTNSQ*KP 83
FH+ R +A+Y NS+ KP
Sbjct: 301 FHAQRLLAVYAQNSKDKP 318
>DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein
protein.
Length = 430
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 598 GLTFFNRCCIS*VGSWNTI 542
GL FFN + VG WN++
Sbjct: 326 GLQFFNLIDQNAVGCWNSL 344
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 520 RACPNVGGVPS 488
RAC GGVPS
Sbjct: 587 RACSTTGGVPS 597
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 160 FTRPPESGPKSVVRLISISTLDDSLN 83
FT PP+SG K + + + +L LN
Sbjct: 216 FTLPPDSGEKLTLGVTILLSLTVFLN 241
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 160 FTRPPESGPKSVVRLISISTLDDSLN 83
FT PP+SG K + + + +L LN
Sbjct: 216 FTLPPDSGEKLTLGVTILLSLTVFLN 241
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 160 FTRPPESGPKSVVRLISISTLDDSLN 83
FT PP+SG K + + + +L LN
Sbjct: 216 FTLPPDSGEKLTLGVTILLSLTVFLN 241
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 160 FTRPPESGPKSVVRLISISTLDDSLN 83
FT PP+SG K + + + +L LN
Sbjct: 216 FTLPPDSGEKLTLGVTILLSLTVFLN 241
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 160 FTRPPESGPKSVVRLISISTLDDSLN 83
FT PP+SG K + + + +L LN
Sbjct: 216 FTLPPDSGEKLTLGVTILLSLTVFLN 241
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 160 FTRPPESGPKSVVRLISISTLDDSLN 83
FT PP+SG K + + + +L LN
Sbjct: 216 FTLPPDSGEKLTLGVTILLSLTVFLN 241
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 160 FTRPPESGPKSVVRLISISTLDDSLN 83
FT PP+SG K + + + +L LN
Sbjct: 284 FTLPPDSGEKLTLGVTILLSLTVFLN 309
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 160 FTRPPESGPKSVVRLISISTLDDSLN 83
FT PP+SG K + + + +L LN
Sbjct: 284 FTLPPDSGEKLTLGVTILLSLTVFLN 309
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,613
Number of Sequences: 438
Number of extensions: 4643
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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