Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22k18
         (655 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064503-1|AAH64503.1|  527|Homo sapiens G protein pathway suppr...   204   2e-52
U20285-1|AAC50906.2|  500|Homo sapiens Gps1 protein.                  203   4e-52
BC000155-1|AAH00155.3|  491|Homo sapiens G protein pathway suppr...   202   7e-52
BT009834-1|AAP88836.1|  475|Homo sapiens G protein pathway suppr...   197   3e-50
AK093283-1|BAC04120.1|  549|Homo sapiens protein ( Homo sapiens ...    94   4e-19
AB209596-1|BAD92833.1|  284|Homo sapiens G protein pathway suppr...    94   4e-19
BC035315-1|AAH35315.1|  431|Homo sapiens THNSL2 protein protein.       30   6.3  
AK001778-1|BAA91904.1|  265|Homo sapiens protein ( Homo sapiens ...    30   6.3  
AC092836-2|AAX88906.1|  265|Homo sapiens unknown protein.              30   6.3  

>BC064503-1|AAH64503.1|  527|Homo sapiens G protein pathway
           suppressor 1 protein.
          Length = 527

 Score =  204 bits (498), Expect = 2e-52
 Identities = 98/173 (56%), Positives = 124/173 (71%), Gaps = 4/173 (2%)
 Frame = +2

Query: 149 FSLKKA*NPPIMFEMNTAEPMQVDIPPEDNENNETEC-YVVENPTLDLETYAASYTGFAK 325
           FSL  + +   +      EPMQ+D+ P+++  N  +  YVVENP+LDLE YAASY+G  +
Sbjct: 37  FSLSASLSACTLLYEGAVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMR 96

Query: 326 LYRLMFVADHCPSLRLEALKMAISYVMTTYNVNLYHTLHKKLSEAVAS-AGLPDIAGSQD 502
           + RL F+ADHCP+LR+EALKMA+S+V  T+NV++Y  +H+KLSEA       PD      
Sbjct: 97  IERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRKLSEATRELQNAPDAIPESG 156

Query: 503 I--PVLDTIWVESKTKKAAIKLEKLDTDLKNYKTNSIKESIRRGHDDLGDHYL 655
           +  P LDT WVE+  KKA +KLEKLDTDLKNYK NSIKESIRRGHDDLGDHYL
Sbjct: 157 VEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYL 209


>U20285-1|AAC50906.2|  500|Homo sapiens Gps1 protein.
          Length = 500

 Score =  203 bits (496), Expect = 4e-52
 Identities = 98/166 (59%), Positives = 123/166 (74%), Gaps = 5/166 (3%)
 Frame = +2

Query: 173 PPIMFEMNTA-EPMQVDIPPEDNENNETEC-YVVENPTLDLETYAASYTGFAKLYRLMFV 346
           P  +F +  A EPMQ+D+ P+++  N  +  YVVENP+LDLE YAASY+G  ++ RL F+
Sbjct: 17  PVQVFNLQGAVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFI 76

Query: 347 ADHCPSLRLEALKMAISYVMTTYNVNLYHTLHKKLSEAVAS-AGLPDIAGSQDI--PVLD 517
           ADHCP+LR+EALKMA+S+V  T+NV++Y  +H+KLSEA       PD      +  P LD
Sbjct: 77  ADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRKLSEATRELQNAPDAIPESGVEPPALD 136

Query: 518 TIWVESKTKKAAIKLEKLDTDLKNYKTNSIKESIRRGHDDLGDHYL 655
           T WVE+  KKA +KLEKLDTDLKNYK NSIKESIRRGHDDLGDHYL
Sbjct: 137 TAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYL 182


>BC000155-1|AAH00155.3|  491|Homo sapiens G protein pathway
           suppressor 1 protein.
          Length = 491

 Score =  202 bits (494), Expect = 7e-52
 Identities = 99/170 (58%), Positives = 125/170 (73%), Gaps = 9/170 (5%)
 Frame = +2

Query: 173 PPIMFEMNTA-EPMQVDIPPEDNENNETEC-YVVENPTLDLETYAASYTGFAKLYRLMFV 346
           P  +F +  A EPMQ+D+ P+++  N  +  YVVENP+LDLE YAASY+G  ++ RL F+
Sbjct: 4   PVQVFNLQGAVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFI 63

Query: 347 ADHCPSLRLEALKMAISYVMTTYNVNLYHTLHKKLSEAVASA-----GLPDIAGSQDI-- 505
           ADHCP+LR+EALKMA+S+V  T+NV++Y  +H+KLSEA  S+       PD      +  
Sbjct: 64  ADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRKLSEATRSSLRELQNAPDAIPESGVEP 123

Query: 506 PVLDTIWVESKTKKAAIKLEKLDTDLKNYKTNSIKESIRRGHDDLGDHYL 655
           P LDT WVE+  KKA +KLEKLDTDLKNYK NSIKESIRRGHDDLGDHYL
Sbjct: 124 PALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYL 173


>BT009834-1|AAP88836.1|  475|Homo sapiens G protein pathway
           suppressor 1 protein.
          Length = 475

 Score =  197 bits (480), Expect = 3e-50
 Identities = 94/157 (59%), Positives = 118/157 (75%), Gaps = 8/157 (5%)
 Frame = +2

Query: 209 MQVDIPPEDNENNETEC-YVVENPTLDLETYAASYTGFAKLYRLMFVADHCPSLRLEALK 385
           MQ+D+ P+++  N  +  YVVENP+LDLE YAASY+G  ++ RL F+ADHCP+LR+EALK
Sbjct: 1   MQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTLRVEALK 60

Query: 386 MAISYVMTTYNVNLYHTLHKKLSEAVASA-----GLPDIAGSQDI--PVLDTIWVESKTK 544
           MA+S+V  T+NV++Y  +H+KLSEA  S+       PD      +  P LDT WVE+  K
Sbjct: 61  MALSFVQRTFNVDMYEEIHRKLSEATRSSLRELQNAPDAIPESGVEPPALDTAWVEATRK 120

Query: 545 KAAIKLEKLDTDLKNYKTNSIKESIRRGHDDLGDHYL 655
           KA +KLEKLDTDLKNYK NSIKESIRRGHDDLGDHYL
Sbjct: 121 KALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYL 157


>AK093283-1|BAC04120.1|  549|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35964 fis, clone TESTI2012592, highly similar to
           G PROTEIN PATHWAY SUPPRESSOR 1. ).
          Length = 549

 Score = 93.9 bits (223), Expect = 4e-19
 Identities = 42/50 (84%), Positives = 44/50 (88%)
 Frame = +2

Query: 506 PVLDTIWVESKTKKAAIKLEKLDTDLKNYKTNSIKESIRRGHDDLGDHYL 655
           P LDT WVE+  KKA +KLEKLDTDLKNYK NSIKESIRRGHDDLGDHYL
Sbjct: 109 PALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYL 158


>AB209596-1|BAD92833.1|  284|Homo sapiens G protein pathway
           suppressor 1 isoform 2 variant protein.
          Length = 284

 Score = 93.9 bits (223), Expect = 4e-19
 Identities = 42/50 (84%), Positives = 44/50 (88%)
 Frame = +2

Query: 506 PVLDTIWVESKTKKAAIKLEKLDTDLKNYKTNSIKESIRRGHDDLGDHYL 655
           P LDT WVE+  KKA +KLEKLDTDLKNYK NSIKESIRRGHDDLGDHYL
Sbjct: 45  PALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYL 94


>BC035315-1|AAH35315.1|  431|Homo sapiens THNSL2 protein protein.
          Length = 431

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +2

Query: 410 TYNVNLYHTLHKKLSEAVASAGLPDIAGSQ 499
           T +VNL   LH KLSEAV S  + D A +Q
Sbjct: 294 TQSVNLPKELHSKLSEAVTSVSVSDEAITQ 323


>AK001778-1|BAA91904.1|  265|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10916 fis, clone OVARC1000309, weakly similar to
           THREONINE SYNTHASE (EC 4.2.99.2). ).
          Length = 265

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +2

Query: 410 TYNVNLYHTLHKKLSEAVASAGLPDIAGSQ 499
           T +VNL   LH KLSEAV S  + D A +Q
Sbjct: 128 TQSVNLPKELHSKLSEAVTSVSVSDEAITQ 157


>AC092836-2|AAX88906.1|  265|Homo sapiens unknown protein.
          Length = 265

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/30 (53%), Positives = 19/30 (63%)
 Frame = +2

Query: 410 TYNVNLYHTLHKKLSEAVASAGLPDIAGSQ 499
           T +VNL   LH KLSEAV S  + D A +Q
Sbjct: 128 TQSVNLPKELHSKLSEAVTSVSVSDEAITQ 157


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,440,860
Number of Sequences: 237096
Number of extensions: 1878100
Number of successful extensions: 6770
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6763
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)