Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22f19
         (603 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   1.3  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   1.7  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   2.3  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   2.3  
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              22   4.0  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   5.3  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   7.0  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   7.0  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   7.0  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   7.0  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   9.3  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 443  VAMATCDLERPSLRVQAKHVAPNQLQAP 360
            V  AT D  RP LR +  ++AP   + P
Sbjct: 1627 VGGATLDKRRPDLRDELGYIAPPNRKLP 1654


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 599 PVRPSPWLC 573
           PV+P PW+C
Sbjct: 231 PVKPCPWIC 239


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 101 NPHWKSFKLFECGIRFRTST 42
           N H K  K+F+C ++++T T
Sbjct: 111 NVHIKISKIFQCFMKYKTIT 130


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -1

Query: 423 PRTTFSPSASETR 385
           PRTTF P A+++R
Sbjct: 162 PRTTFEPRATDSR 174


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -2

Query: 101 NPHWKSFKLFECGIRFRT 48
           N H K  K+F+C  +F+T
Sbjct: 111 NVHLKITKIFQCITKFKT 128


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = -2

Query: 293 AINGPNEDRDCFNAFFANKTVTSKRSYKTIV*LKHFTITQQST 165
           AIN   ED    +   AN+T  SK  Y+++V L  +T  Q  T
Sbjct: 224 AINHMFEDARLLDEPSANRTDLSKDDYESLVHL--YTRDQSET 264


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 326 TDRRQPQDSTYAINGPNEDRDCFN 255
           T +R+    T A  GPNE   C N
Sbjct: 406 TQKREGGPPTGATTGPNEIVTCTN 429


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 326 TDRRQPQDSTYAINGPNEDRDCFN 255
           T +R+    T A  GPNE   C N
Sbjct: 426 TQKREGGPPTGATTGPNEIVTCTN 449


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 326 TDRRQPQDSTYAINGPNEDRDCFN 255
           T +R+    T A  GPNE   C N
Sbjct: 375 TQKREGGPPTGATTGPNEIVTCTN 398


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -2

Query: 116 YQALENPHWKSF 81
           Y  L +PHW++F
Sbjct: 38  YSDLVHPHWRAF 49


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 116 YQALENPHWKSF 81
           Y  L  PHW++F
Sbjct: 38  YSDLVRPHWRAF 49


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,320
Number of Sequences: 438
Number of extensions: 2894
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)