Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22f10
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D87010-4|BAA20007.1|  104|Homo sapiens V4-1 protein.                   30   5.7  
D87009-2|BAA20003.1|  104|Homo sapiens V4-1 protein.                   30   5.7  
AY424459-1|AAR02932.1|   88|Homo sapiens immunoglobulin lambda l...    30   5.7  
AY424436-1|AAR02910.1|   90|Homo sapiens immunoglobulin lambda l...    30   5.7  
AJ414926-1|CAC94159.1|   91|Homo sapiens immunoglobulin lambda c...    30   5.7  
AJ249379-1|CAC41117.1|   94|Homo sapiens immunoglobulin lambda v...    30   5.7  
AF386164-1|AAM46262.1|   91|Homo sapiens immunoglobulin lambda l...    30   5.7  
AF247235-1|AAG24683.1|   95|Homo sapiens immunoglobulin lambda l...    30   5.7  
AF247234-1|AAG24682.1|   95|Homo sapiens immunoglobulin lambda l...    30   5.7  
AJ241418-1|CAB46479.1|   97|Homo sapiens immunoglobulin light ch...    29   9.9  
AB064201-1|BAC01829.1|  276|Homo sapiens immunoglobulin lambda l...    29   9.9  

>D87010-4|BAA20007.1|  104|Homo sapiens V4-1 protein.
          Length = 104

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 45  YTRSSGSPNKYLLKYYNHSDAVVGS 119
           Y +  GSP +YLL YY+ SD   GS
Sbjct: 38  YQQKPGSPPRYLLYYYSDSDKGQGS 62


>D87009-2|BAA20003.1|  104|Homo sapiens V4-1 protein.
          Length = 104

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 45  YTRSSGSPNKYLLKYYNHSDAVVGS 119
           Y +  GSP +YLL YY+ SD   GS
Sbjct: 38  YQQKPGSPPRYLLYYYSDSDKGQGS 62


>AY424459-1|AAR02932.1|   88|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 88

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 45  YTRSSGSPNKYLLKYYNHSDAVVGS 119
           Y +  GSP +YLL YY+ SD   GS
Sbjct: 22  YQQKPGSPPRYLLYYYSDSDKGQGS 46


>AY424436-1|AAR02910.1|   90|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 90

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 45  YTRSSGSPNKYLLKYYNHSDAVVGS 119
           Y +  GSP +YLL YY+ SD   GS
Sbjct: 22  YQQKPGSPPRYLLYYYSDSDKGQGS 46


>AJ414926-1|CAC94159.1|   91|Homo sapiens immunoglobulin lambda
           chain variable region protein.
          Length = 91

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 45  YTRSSGSPNKYLLKYYNHSDAVVGS 119
           Y +  GSP +YLL YY+ SD   GS
Sbjct: 21  YQQKPGSPPRYLLYYYSDSDKGQGS 45


>AJ249379-1|CAC41117.1|   94|Homo sapiens immunoglobulin lambda
           variable region protein.
          Length = 94

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 45  YTRSSGSPNKYLLKYYNHSDAVVGS 119
           Y +  GSP +YLL YY+ SD   GS
Sbjct: 38  YQQKPGSPPRYLLYYYSDSDKGQGS 62


>AF386164-1|AAM46262.1|   91|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 91

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 45  YTRSSGSPNKYLLKYYNHSDAVVGS 119
           Y +  GSP +YLL YY+ SD   GS
Sbjct: 21  YQQKPGSPPRYLLYYYSDSDKGQGS 45


>AF247235-1|AAG24683.1|   95|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 95

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 45  YTRSSGSPNKYLLKYYNHSDAVVGS 119
           Y +  GSP +YLL YY+ SD   GS
Sbjct: 26  YQQKPGSPPRYLLYYYSDSDKGQGS 50


>AF247234-1|AAG24682.1|   95|Homo sapiens immunoglobulin lambda
           light chain variable region protein.
          Length = 95

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 45  YTRSSGSPNKYLLKYYNHSDAVVGS 119
           Y +  GSP +YLL YY+ SD   GS
Sbjct: 27  YQQKPGSPPRYLLYYYSDSDKGQGS 51


>AJ241418-1|CAB46479.1|   97|Homo sapiens immunoglobulin light chain
           variable region protein.
          Length = 97

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = +3

Query: 45  YTRSSGSPNKYLLKYYNHSDAVVGS 119
           Y +  GSP +YLLKY + SD   GS
Sbjct: 38  YQQKPGSPPQYLLKYRSDSDKQQGS 62


>AB064201-1|BAC01829.1|  276|Homo sapiens immunoglobulin lambda
           light chain VLJ region protein.
          Length = 276

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3

Query: 45  YTRSSGSPNKYLLKYYNHSDAVVGS 119
           Y +  GSP +YLL+Y + SD + GS
Sbjct: 60  YQQKPGSPPQYLLRYKSDSDKLQGS 84


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,946,510
Number of Sequences: 237096
Number of extensions: 977148
Number of successful extensions: 1755
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1755
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)