Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22e17
         (590 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    28   4.3  
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    28   5.7  
Z81109-1|CAB03245.1|  485|Caenorhabditis elegans Hypothetical pr...    27   7.5  
U29097-4|AAM98031.1|  308|Caenorhabditis elegans Hypothetical pr...    27   7.5  
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z46795-6|CAE48511.2|  838|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z46792-8|CAE48495.2|  838|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr...    27   10.0 
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr...    27   10.0 
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.      27   10.0 

>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 28.3 bits (60), Expect = 4.3
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -2

Query: 415  AQMSSAPATMHATPTYRTGSA*SSARPSQLISAPAHNNTM 296
            A  S  P+   +TPT  TGS  SS   S  IS    + TM
Sbjct: 1409 ASSSPVPSQTSSTPTNPTGSTESSTLLSSTISGSTQHTTM 1448


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
           protein W09B6.1a protein.
          Length = 2054

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +1

Query: 373 WAWRASSPEHYSSARRCVAGC-NLLLGS 453
           W+W +S     S    C+A C NLL GS
Sbjct: 775 WSWHSSKANEQSKFNDCLAQCQNLLAGS 802


>Z81109-1|CAB03245.1|  485|Caenorhabditis elegans Hypothetical
           protein R10D12.1 protein.
          Length = 485

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 393 AGALLICAAMCCWLQSPARQPQNERASTDTHQIDDPIH 506
           A  LLIC A+ CWL +    P  +R    +   + P++
Sbjct: 444 AAILLICNAIFCWLATAKPAPWTDRTIKHSATKNTPLY 481


>U29097-4|AAM98031.1|  308|Caenorhabditis elegans Hypothetical
           protein F18C5.4 protein.
          Length = 308

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = -3

Query: 366 APVPRSLQPDPAS*LALPHITTP 298
           APVP +L  DPA  + +P+I +P
Sbjct: 274 APVPATLPSDPAPEVRIPYIPSP 296


>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical
           protein C52A11.4f protein.
          Length = 2371

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +2

Query: 209 NDNDAASTRLSTRHVIRR--RQTITKAIQVWHGVVM 310
           +D D  STR  T H+++R  R+  +K+++ +HG+ +
Sbjct: 752 SDIDLTSTRAETTHLLQRVSRRLRSKSLENFHGLAV 787


>Z46795-6|CAE48511.2|  838|Caenorhabditis elegans Hypothetical
           protein C52A11.4b protein.
          Length = 838

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +2

Query: 209 NDNDAASTRLSTRHVIRR--RQTITKAIQVWHGVVM 310
           +D D  STR  T H+++R  R+  +K+++ +HG+ +
Sbjct: 774 SDIDLTSTRAETTHLLQRVSRRLRSKSLENFHGLAV 809


>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical
           protein C52A11.4a protein.
          Length = 2393

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +2

Query: 209 NDNDAASTRLSTRHVIRR--RQTITKAIQVWHGVVM 310
           +D D  STR  T H+++R  R+  +K+++ +HG+ +
Sbjct: 774 SDIDLTSTRAETTHLLQRVSRRLRSKSLENFHGLAV 809


>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical
           protein C52A11.4e protein.
          Length = 2184

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +2

Query: 209 NDNDAASTRLSTRHVIRR--RQTITKAIQVWHGVVM 310
           +D D  STR  T H+++R  R+  +K+++ +HG+ +
Sbjct: 565 SDIDLTSTRAETTHLLQRVSRRLRSKSLENFHGLAV 600


>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical
           protein C52A11.4d protein.
          Length = 2491

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +2

Query: 209 NDNDAASTRLSTRHVIRR--RQTITKAIQVWHGVVM 310
           +D D  STR  T H+++R  R+  +K+++ +HG+ +
Sbjct: 872 SDIDLTSTRAETTHLLQRVSRRLRSKSLENFHGLAV 907


>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical
           protein C52A11.4f protein.
          Length = 2371

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +2

Query: 209 NDNDAASTRLSTRHVIRR--RQTITKAIQVWHGVVM 310
           +D D  STR  T H+++R  R+  +K+++ +HG+ +
Sbjct: 752 SDIDLTSTRAETTHLLQRVSRRLRSKSLENFHGLAV 787


>Z46792-8|CAE48495.2|  838|Caenorhabditis elegans Hypothetical
           protein C52A11.4b protein.
          Length = 838

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +2

Query: 209 NDNDAASTRLSTRHVIRR--RQTITKAIQVWHGVVM 310
           +D D  STR  T H+++R  R+  +K+++ +HG+ +
Sbjct: 774 SDIDLTSTRAETTHLLQRVSRRLRSKSLENFHGLAV 809


>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical
           protein C52A11.4a protein.
          Length = 2393

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +2

Query: 209 NDNDAASTRLSTRHVIRR--RQTITKAIQVWHGVVM 310
           +D D  STR  T H+++R  R+  +K+++ +HG+ +
Sbjct: 774 SDIDLTSTRAETTHLLQRVSRRLRSKSLENFHGLAV 809


>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical
           protein C52A11.4e protein.
          Length = 2184

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +2

Query: 209 NDNDAASTRLSTRHVIRR--RQTITKAIQVWHGVVM 310
           +D D  STR  T H+++R  R+  +K+++ +HG+ +
Sbjct: 565 SDIDLTSTRAETTHLLQRVSRRLRSKSLENFHGLAV 600


>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical
           protein C52A11.4d protein.
          Length = 2491

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +2

Query: 209 NDNDAASTRLSTRHVIRR--RQTITKAIQVWHGVVM 310
           +D D  STR  T H+++R  R+  +K+++ +HG+ +
Sbjct: 872 SDIDLTSTRAETTHLLQRVSRRLRSKSLENFHGLAV 907


>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical
           protein C52A11.4c protein.
          Length = 2202

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +2

Query: 209 NDNDAASTRLSTRHVIRR--RQTITKAIQVWHGVVM 310
           +D D  STR  T H+++R  R+  +K+++ +HG+ +
Sbjct: 583 SDIDLTSTRAETTHLLQRVSRRLRSKSLENFHGLAV 618


>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
          Length = 2166

 Score = 27.1 bits (57), Expect = 10.0
 Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
 Frame = +2

Query: 209 NDNDAASTRLSTRHVIRR--RQTITKAIQVWHGVVM 310
           +D D  STR  T H+++R  R+  +K+++ +HG+ +
Sbjct: 543 SDIDLTSTRAETTHLLQRVSRRLRSKSLENFHGLAV 578


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,425,651
Number of Sequences: 27780
Number of extensions: 325058
Number of successful extensions: 949
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)