Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt22e16
(613 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|c... 39 5e-04
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 39 7e-04
SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter Itr1|Schizo... 38 9e-04
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 38 0.001
SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces ... 38 0.002
SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter Ght7|Schizosa... 38 0.002
SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomy... 36 0.005
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 35 0.008
SPCC1235.13 |ght6|meu12|hexose transporter Ght6 |Schizosaccharom... 34 0.019
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 33 0.025
SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux transporte... 30 0.30
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 29 0.40
SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyce... 28 0.93
SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|ch... 28 1.2
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 27 1.6
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 26 3.7
SPAC328.05 |||RNA-binding protein involved in export of mRNAs|Sc... 26 3.7
SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase Tpp1|Schi... 26 4.9
SPBC947.06c |||spermidine family transporter |Schizosaccharomyce... 26 4.9
SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|ch... 26 4.9
SPCC16C4.05 |||RNase P and RNase MRP subunit |Schizosaccharomyce... 25 6.5
SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces po... 25 8.6
SPBC405.03c |||membrane transporter |Schizosaccharomyces pombe|c... 25 8.6
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 25 8.6
SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces pomb... 25 8.6
>SPBC16A3.17c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 599
Score = 39.1 bits (87), Expect = 5e-04
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 9/123 (7%)
Frame = +1
Query: 271 GTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISX 450
G N LGRK + F +L + S + I ++V R + G+ GGG++ + I IS
Sbjct: 152 GVFCNILGRKIVLYICIFFFMLGSALCGASQNMIWLIVCRAIQGLGGGGIISLVNIIISD 211
Query: 451 IADDSIR----GALASSPLFLYCVGVLLSYIIGWFSTYHVIIWISL-----ALSVTGVFL 603
I R G LA++ G ++ I +T+ I +I+L A ++ VFL
Sbjct: 212 ITPLRTRPMYSGILATAWGAALVAGPIIGGAICQRTTWRWIFFINLPSGGIATALIVVFL 271
Query: 604 FLL 612
LL
Sbjct: 272 HLL 274
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 38.7 bits (86), Expect = 7e-04
Identities = 27/121 (22%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Frame = +1
Query: 265 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPI 438
++ L++ +G++ + T+ ++ I+++++ P + I+VA+ G+S G L V+AP
Sbjct: 75 LSSPLMDRIGKRTSIMFWTIVYLIG-IILQVTAVPSWVQIMVAKIWTGLSIGALSVLAPG 133
Query: 439 FISXIADDSIRGALASSPLFLYCVGVLLSYII--GWFSTYHVIIW-ISLALSVT-GVFLF 606
F S +A +RG + ++ G+ ++ I G + W +S+ +++ G+ F
Sbjct: 134 FQSEVAPADLRGTIVTTYQLAVTGGIFIAACINMGTHKLHKTAQWRVSMGINLLWGIITF 193
Query: 607 L 609
+
Sbjct: 194 I 194
>SPAC4F8.15 |itr1|SPAC7D4.01|myo-inositol transporter
Itr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 575
Score = 38.3 bits (85), Expect = 9e-04
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 265 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPIL-ILVARFLAGISGGGLLVMAPIF 441
I G L + GRK I + ++ +IV++++ + ++V RF+ G G ++ P++
Sbjct: 146 IAGALADFFGRKPV-IAIASIIIIVGSIVQVTAHHLWHMIVGRFVIGWGVGIASLIIPLY 204
Query: 442 ISXIADDSIRGALASSPLFLYCVGVLLSY 528
+S IA IRG L + L G +++Y
Sbjct: 205 LSEIAPSKIRGRLVIIYVLLITAGQVIAY 233
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 37.9 bits (84), Expect = 0.001
Identities = 26/121 (21%), Positives = 66/121 (54%), Gaps = 6/121 (4%)
Frame = +1
Query: 265 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPI 438
++ L++ +G++ + T+ ++ I+++++ P + I+VA+ G++ G L V+AP
Sbjct: 75 LSSPLMDRIGKRVSIMFWTIVYLIG-IILQVTAVPSWVQIMVAKIWTGLAIGALSVLAPG 133
Query: 439 FISXIADDSIRGALASSPLFLYCVGVLLSYII--GWFSTYHVIIW-ISLALSVT-GVFLF 606
F S +A ++RG + ++ G+ ++ I G + W +S+ +++ G+ +F
Sbjct: 134 FQSEVAPATLRGTIVTTYQLAVTGGIFIAACINMGTHKLHKTAQWRVSMGINLLWGIIMF 193
Query: 607 L 609
+
Sbjct: 194 I 194
>SPCC548.07c |ght1||hexose transporter Ght1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 37.5 bits (83), Expect = 0.002
Identities = 26/113 (23%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Frame = +1
Query: 265 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPI 438
I+ + +G++N I + ++ I+++++ P + I+VA+ G+ G L V+AP
Sbjct: 75 ISSPTTDRIGKRNSIIGFCVIYLIG-VIIQVTAVPSWVQIMVAKIWTGLGIGALSVLAPG 133
Query: 439 FISXIADDSIRGALASSPLFLYCVGVLLSYII--GWFSTYHVIIW-ISLALSV 588
+ S +A IRG + + G+ ++ I G Y W +S+ +++
Sbjct: 134 YQSEVAPPHIRGTIVVTYQLCVTAGIFIAACINMGTHKLYKTAQWRVSIGINL 186
>SPBC1348.14c |ght7|SPBPB8B6.01c|hexose transporter
Ght7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 37.5 bits (83), Expect = 0.002
Identities = 23/92 (25%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +1
Query: 265 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPI 438
++ + + +G++ IV T ++ I+++++ P + ILVA+ G+S G L V+ P
Sbjct: 43 LSSPVADKIGKRLSIIVWTTVYLIG-IIIQVTTVPSWVQILVAKIWTGLSIGALSVITPG 101
Query: 439 FISXIADDSIRGALASSPLFLYCVGVLLSYII 534
+ S +A +RGA+ ++ +G+ ++ I
Sbjct: 102 YQSEVAPAIMRGAIVTTYQLFITLGIFIAACI 133
>SPAC20G8.03 |itr2||MFS myo-inositol transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 557
Score = 35.9 bits (79), Expect = 0.005
Identities = 22/87 (25%), Positives = 43/87 (49%)
Frame = +1
Query: 268 TGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFIS 447
+G L + +GRK + V+ I+ S + +++V RF+ G G ++ P++I+
Sbjct: 140 SGWLADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMYIT 199
Query: 448 XIADDSIRGALASSPLFLYCVGVLLSY 528
+A +RG L + G L++Y
Sbjct: 200 ELAPARLRGRLVIIYVVFITGGQLIAY 226
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 35.1 bits (77), Expect = 0.008
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +1
Query: 346 IVELSSSPILILVARFLAGISGGGLLVMAPIFISXIADDSIRGALASS 489
+V S I +LV + LAG+ G L V++P + S +A IRGA+ ++
Sbjct: 103 LVTAVPSWIQVLVGKILAGVGIGALSVLSPGYQSEVAPPQIRGAVVAT 150
>SPCC1235.13 |ght6|meu12|hexose transporter Ght6
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 535
Score = 33.9 bits (74), Expect = 0.019
Identities = 19/69 (27%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Frame = +1
Query: 334 LSWTIVELSSSP--ILILVARFLAGISGGGLLVMAPIFISXIADDSIRGALASSPLFLYC 507
++ IV+L++ P + ++VA+ G+ G L V+AP + S + IRGA+ ++
Sbjct: 97 ITGVIVQLTTIPSWVQMMVAKIWTGLGIGALSVIAPGYQSESSPPHIRGAIVTTYQLFIT 156
Query: 508 VGVLLSYII 534
+G+ ++ I
Sbjct: 157 LGIFIAACI 165
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 33.5 bits (73), Expect = 0.025
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +1
Query: 346 IVELSSSP--ILILVARFLAGISGGGLLVMAPIFISXIADDSIRGALASSPLFLYCVGVL 519
IV++++ P + I+VA+ GI G L V+AP + S A SIRG + + G+
Sbjct: 105 IVQVTAVPSWVQIMVAKIWTGIGIGALSVLAPGYQSETAPPSIRGTVVVTYQLFVTGGIF 164
Query: 520 LSYII 534
++ I
Sbjct: 165 IAACI 169
>SPBC12C2.13c |fnx1|SPBC21D10.04c|MFS multidrug efflux
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 531
Score = 29.9 bits (64), Expect = 0.30
Identities = 26/89 (29%), Positives = 37/89 (41%)
Frame = +1
Query: 271 GTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISX 450
G L + GR+ + L +S S + +AR LAGI GGGL M+ I S
Sbjct: 87 GRLSDIFGRRPTVVFANAAFTLGTFWCGISRSLPELCMARALAGIGGGGLGTMSSIISSD 146
Query: 451 IADDSIRGALASSPLFLYCVGVLLSYIIG 537
I RG ++ +G L +G
Sbjct: 147 IVSLRERGTWQGITNIVWGIGGSLGGPLG 175
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 29.5 bits (63), Expect = 0.40
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = +3
Query: 3 IIISDVECGGILFFFFFVGENERKIESGVHFFCV 104
+ ++++ +LFF+F ++E+ +++ HF CV
Sbjct: 856 VCVNELSGKNVLFFYFLEDDSEKLLKACQHFICV 889
>SPCC1529.01 ||SPCC794.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 462
Score = 28.3 bits (60), Expect = 0.93
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)
Frame = +1
Query: 304 GGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISXIADDSIRG--- 474
G ++ +FN+ L+ + + + RFLAG + + IS + RG
Sbjct: 118 GNVIFIVFNMACG----LARTKAQMYIFRFLAGFGSATPMGLGSGTISDLFTPDERGKAV 173
Query: 475 -ALASSPLFLYCVGVLLSYIIGWFSTYHVIIWISLALS 585
++ +PL +G ++S I ++TY I W + S
Sbjct: 174 AVMSLAPLLGPTIGPVVSGFIAEYTTYKWIFWSTTIFS 211
>SPBC3E7.06c |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 27.9 bits (59), Expect = 1.2
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 376 ILVARFLAGISGGGLLVMAPIFISXIADDSIRGALASSPLFLYCVGVLLSYIIGWF 543
++ AR +AGI GGG+ I +S I RG + +G L +G +
Sbjct: 180 LVAARAIAGIGGGGMNSTVSILMSDIVPLKQRGTYQGIINVFFAIGSSLGGPVGGY 235
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 27.5 bits (58), Expect = 1.6
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -1
Query: 130 SPSKVNRSHTQKK*TPDSIFLSFSPTKKKKNRIPPHSTS 14
S S + S +K +SIF S +KKK+ IPP S+S
Sbjct: 717 SSSSKSASSFKKDRDKESIFGSLFGSKKKQTEIPPVSSS 755
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 26.2 bits (55), Expect = 3.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 440 NIGAITSKPPPEIPARNLATRISIGDELSSTMVHDKTLNR 321
N G + +P P P N+ TRI I + S + + +NR
Sbjct: 631 NSGQSSGRPGPLSPNLNVTTRIDIKGKKGSMHLQPRDVNR 670
>SPAC328.05 |||RNA-binding protein involved in export of
mRNAs|Schizosaccharomyces pombe|chr 1|||Manual
Length = 434
Score = 26.2 bits (55), Expect = 3.7
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -3
Query: 347 MVHDKTLNRVKTIPPF---FLPRLLISVPVMAVPSIAPNDGRLPRRD 216
++H T N T F FL L IS+PV +P+IAP LP +
Sbjct: 380 VMHIPTTNSPLTPQSFTNSFLGYLPISMPVANMPAIAPISVALPENN 426
>SPAC19G12.15c |tpp1||trehalose-6-phosphate phosphatase
Tpp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 817
Score = 25.8 bits (54), Expect = 4.9
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 321 SVQCFIMDHSGTKFITDTDPGCEVPSRNL 407
S + F+MD+ GT DP VPS+ L
Sbjct: 563 SKRLFMMDYDGTLTPIVRDPNAAVPSKKL 591
>SPBC947.06c |||spermidine family transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 498
Score = 25.8 bits (54), Expect = 4.9
Identities = 23/88 (26%), Positives = 34/88 (38%)
Frame = +1
Query: 292 GRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISXIADDSIR 471
GRK G +V ++L S S I+ RF AG+ G +V + ++ + + R
Sbjct: 120 GRKIGVLVPFFLSILFTIGTASSDSVAAIMCTRFFAGLFAGAPVVSSGGVMADLWCPAQR 179
Query: 472 GALASSPLFLYCVGVLLSYIIGWFSTYH 555
G F G II T H
Sbjct: 180 GTALIFYAFFVVSGADFGPIISSLVTEH 207
>SPBC691.01 |||palmitoyltransferase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 312
Score = 25.8 bits (54), Expect = 4.9
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = +3
Query: 297 KKWWNRFNSVQCFIMDHSGTKFITDTDPG 383
K W R S F +H ++ + +DPG
Sbjct: 228 KNWKTRIYSFSVFFPEHMDSRVLVQSDPG 256
>SPCC16C4.05 |||RNase P and RNase MRP subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 201
Score = 25.4 bits (53), Expect = 6.5
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 400 RLGTSQPGSVSVMNLVPLWSMIK 332
+LG S+ G+++V + PLW +K
Sbjct: 127 KLGLSRAGAIAVQDDSPLWKYLK 149
>SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 161
Score = 25.0 bits (52), Expect = 8.6
Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +1
Query: 313 VLTLFNVLSWTIVELSSSPILILVARFL---AGISGGGLLVMAPIFISXIADDSIRGALA 483
++ ++ ++ ++ + IL L + F+ AG+S G + A I + D +RG
Sbjct: 63 IIAIYGLVVSVLISGNLKQILSLYSGFIQLGAGLSVGLAGLAAGFAIGIVGDAGVRGTAQ 122
Query: 484 SSPLFLYCVGVLL 522
LF+ + +L+
Sbjct: 123 QPRLFVAMILILI 135
>SPBC405.03c |||membrane transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 341
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 277 LINSLGRKNGGIVLTLFNVLSWTIVELSSSPIL 375
++ ++G+ G+VL LF V W I +S +L
Sbjct: 2 VLQAIGKHALGVVLLLFVVFLWLISSFLTSSLL 34
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 25.0 bits (52), Expect = 8.6
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 407 EIPARNLATRISIGDELSSTMVHDKTLNRVKTIPPFF 297
EI A + IS+ +E M H+K + V T+PP F
Sbjct: 139 EIIAMTMEHYISLAEE----MAHEKITDLVLTVPPHF 171
>SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 386
Score = 25.0 bits (52), Expect = 8.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -3
Query: 392 NLATRISIGDELSSTMVHDKTLNRVKTIP 306
N + I ELS+ M D TLN VK P
Sbjct: 29 NSIKALPIQSELSAMMSKDNTLNHVKQEP 57
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,584,587
Number of Sequences: 5004
Number of extensions: 53868
Number of successful extensions: 179
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 179
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 267622334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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