Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt22e16
(613 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical ... 40 0.001
AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical ... 40 0.001
Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical pr... 40 0.002
AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical ... 39 0.003
AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical ... 38 0.007
AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical ... 36 0.023
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 36 0.030
AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical... 34 0.070
U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical pr... 33 0.16
AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical ... 33 0.16
Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical pr... 32 0.28
AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical... 32 0.28
U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion t... 31 0.86
AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific... 31 0.86
U50311-4|AAA92309.1| 491|Caenorhabditis elegans Serpentine rece... 29 2.6
U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine rece... 29 2.6
Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical ... 29 3.5
U28737-2|AAA68272.1| 455|Caenorhabditis elegans Patterned expre... 28 4.6
AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical ... 28 6.0
Z69384-3|CAA93418.1| 475|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF026214-3|AAB71312.2| 493|Caenorhabditis elegans Amino acid tr... 27 8.0
>Z46381-4|CAA86519.2| 604|Caenorhabditis elegans Hypothetical
protein M01F1.5 protein.
Length = 604
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/88 (28%), Positives = 47/88 (53%)
Frame = +1
Query: 289 LGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISXIADDSI 468
LGRK I ++ + I + + I++L+ R L G++ G ++ PI++S + I
Sbjct: 95 LGRKKIIIGASVTFTIGAIICAAAWTKIILLIGRILLGLAIGFASMIVPIYVSEASPSHI 154
Query: 469 RGALASSPLFLYCVGVLLSYIIGWFSTY 552
RG L + + VG++++ IIG +Y
Sbjct: 155 RGKLVTGFQLMITVGLVIANIIGGAFSY 182
>AF040646-6|AAK31540.1| 510|Caenorhabditis elegans Hypothetical
protein H17B01.1b protein.
Length = 510
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Frame = +1
Query: 268 TGTLINSLGRKNGGIVLTLFNVLSWTIVELSSS----PILILVARFLAGISGGGLLVMAP 435
+G L + +GR+ L + + ++ L+ S P++IL R + G++ G + P
Sbjct: 117 SGWLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVIL-GRLIIGLNCGFSSALVP 175
Query: 436 IFISXIADDSIRGALASSPLFLYCVGVLLSYIIG 537
+F++ I+ +++RG L S L + +L+S I G
Sbjct: 176 MFLTEISPNNLRGMLGSLHQLLVTIAILVSQIFG 209
>AF040646-5|AAK31539.1| 492|Caenorhabditis elegans Hypothetical
protein H17B01.1a protein.
Length = 492
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Frame = +1
Query: 268 TGTLINSLGRKNGGIVLTLFNVLSWTIVELSSS----PILILVARFLAGISGGGLLVMAP 435
+G L + +GR+ L + + ++ L+ S P++IL R + G++ G + P
Sbjct: 99 SGWLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVIL-GRLIIGLNCGFSSALVP 157
Query: 436 IFISXIADDSIRGALASSPLFLYCVGVLLSYIIG 537
+F++ I+ +++RG L S L + +L+S I G
Sbjct: 158 MFLTEISPNNLRGMLGSLHQLLVTIAILVSQIFG 191
>Z69787-2|CAA93635.2| 474|Caenorhabditis elegans Hypothetical
protein C44C10.3 protein.
Length = 474
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/56 (37%), Positives = 34/56 (60%)
Frame = +1
Query: 259 TAITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLV 426
T + GTL + GRK GI++ + ++S LS + L+ +ARF +G+S G+LV
Sbjct: 100 TVLFGTLSDKYGRKPIGILVIVIAIISLLGTGLSPNRQLLFIARFCSGLSIAGVLV 155
>AL021497-2|CAA16400.1| 606|Caenorhabditis elegans Hypothetical
protein Y51A2D.4 protein.
Length = 606
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/96 (22%), Positives = 48/96 (50%)
Frame = +1
Query: 265 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFI 444
++GT + +GR+ + + + + S + I++LV R L GI+ G ++ P+++
Sbjct: 84 MSGTSSDYIGRRKVILGASAIFTIGALVCAASVNKIMLLVGRVLLGIAIGFASMIVPVYL 143
Query: 445 SXIADDSIRGALASSPLFLYCVGVLLSYIIGWFSTY 552
A +RG L ++ + G +++ I G +Y
Sbjct: 144 GETAPTHVRGMLVAAFALMISFGQVVANITGGAFSY 179
>AL021497-3|CAA16405.1| 613|Caenorhabditis elegans Hypothetical
protein Y51A2D.5 protein.
Length = 613
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/87 (25%), Positives = 43/87 (49%)
Frame = +1
Query: 292 GRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISXIADDSIR 471
GRK I TL V I ++ + I++L+ R G+ G ++ P+++ + +R
Sbjct: 94 GRKPIIIGSTLIFVCGAVICAVAWTKIVMLIGRIFLGVGIGFASMVVPVYLGEASPTHVR 153
Query: 472 GALASSPLFLYCVGVLLSYIIGWFSTY 552
G L S+ + G +++ I+G +Y
Sbjct: 154 GTLVSAFAMMISFGQVVANIMGGVFSY 180
>AF039046-2|AAB94218.2| 516|Caenorhabditis elegans Hypothetical
protein R09B5.11 protein.
Length = 516
Score = 35.9 bits (79), Expect = 0.023
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 268 TGTLINSLGRKNGGI---VLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPI 438
+G L + GRK+ + +L L + + +L + +I+ RFL G++ G + P+
Sbjct: 118 SGFLADKFGRKSTLLYNNILALLAAVCLSTSKLFNFYPMIVFGRFLVGLNCGITSGLVPM 177
Query: 439 FISXIADDSIRGALASSPLFLYCVGVLLSYIIG 537
F++ +A ++RG S V ++LS +G
Sbjct: 178 FLTELAPANLRGKCGSFHQLNISVAIVLSQALG 210
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 35.5 bits (78), Expect = 0.030
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +1
Query: 265 ITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFI 444
+ G + +S GRK G V +L ++ W IV S + + ++R + G GG + + +FI
Sbjct: 145 VFGQISDSFGRKIGSQVASLGMLIGWLIVVQSRNLLHFTISRTIVGFFTGGSISIINVFI 204
>AL132860-24|CAB60506.1| 767|Caenorhabditis elegans Hypothetical
protein Y56A3A.30 protein.
Length = 767
Score = 34.3 bits (75), Expect = 0.070
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 5/85 (5%)
Frame = -3
Query: 482 AKAPLMESSAXSDINIGAITSKPPPEIPARNLATRISIGDELSSTMVHDKTLNRVK--TI 309
A+ P+ + S SD NIG PPE A+ LA R S + + + + R++ +
Sbjct: 485 AEVPIPQCSGHSDGNIGGTNEVTPPEQEAQVLAPRRSERSRIKNIWLSRDEVERLRYEFV 544
Query: 308 PP---FFLPRLLISVPVMAVPSIAP 243
PP +P+ P +P++ P
Sbjct: 545 PPPSRKDIPKCTAKKPEAEIPNVEP 569
>U41023-1|AAA82340.1| 569|Caenorhabditis elegans Hypothetical
protein F53H8.3 protein.
Length = 569
Score = 33.1 bits (72), Expect = 0.16
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +1
Query: 292 GRKNGGI---VLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFISXIADD 462
GR+NG +L +F L + + SSP L++ RF+ GI+ G + P+++ I
Sbjct: 85 GRRNGMFFNGILNVFAALFELVAKRFSSPELLIFGRFVYGINMGLSSGLVPMYLMEITPY 144
Query: 463 SIRG 474
RG
Sbjct: 145 KYRG 148
>AF125960-2|AAD14736.1| 478|Caenorhabditis elegans Hypothetical
protein T12B3.2 protein.
Length = 478
Score = 33.1 bits (72), Expect = 0.16
Identities = 20/65 (30%), Positives = 35/65 (53%)
Frame = +1
Query: 259 TAITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPI 438
T + G+L + GR+ GI++ + S L+ S ++ RFL G+S GG+LV+
Sbjct: 100 TLLFGSLSDRFGRRPIGILVISNAICSTFASGLAPSVKILFPLRFLVGLSIGGMLVVICA 159
Query: 439 FISXI 453
+I +
Sbjct: 160 WIMEV 164
>Z70683-6|CAA94591.2| 512|Caenorhabditis elegans Hypothetical
protein F13B12.2 protein.
Length = 512
Score = 32.3 bits (70), Expect = 0.28
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 367 PILILVARFLAGISGGGLLVMAPIFISXIADDSIRGALASSPLFLYCVGVLLSYI 531
PI +V R L G+ G AP+++ I +I+G+++ C G L I
Sbjct: 138 PIAFIVGRILTGVYTGLACAFAPLYLQQIIPKNIKGSMSCFLHIAVCFGSSLGAI 192
>AL161712-10|CAC35900.1| 533|Caenorhabditis elegans Hypothetical
protein Y66D12A.13 protein.
Length = 533
Score = 32.3 bits (70), Expect = 0.28
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 259 TAITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPI 438
+AI G L + GRK ++ + T SSS + ++ RF GI GGL + I
Sbjct: 129 SAIAGQLSDLYGRKKITLLFLCMMLFFSTSSSFSSSIEVFIIVRFFIGICCGGLTTVGSI 188
Query: 439 FI 444
+
Sbjct: 189 LV 190
>U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion
transporter protein 1 protein.
Length = 526
Score = 30.7 bits (66), Expect = 0.86
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 262 AITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIF 441
AI G + ++ GR+ I+ + N + I S S ++ R ++GI GGL V+ ++
Sbjct: 141 AIFGQVSDNFGRRKALIISCIGNAIFNLISSYSPSLFYFMLWRTVSGIFAGGLTVVQMVY 200
Query: 442 I 444
+
Sbjct: 201 M 201
>AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific
organic anion transporterprotein.
Length = 526
Score = 30.7 bits (66), Expect = 0.86
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 262 AITGTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIF 441
AI G + ++ GR+ I+ + N + I S S ++ R ++GI GGL V+ ++
Sbjct: 141 AIFGQVSDNFGRRKALIISCIGNAIFNLISSYSPSLFYFMLWRTVSGIFAGGLTVVQMVY 200
Query: 442 I 444
+
Sbjct: 201 M 201
>U50311-4|AAA92309.1| 491|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform a protein.
Length = 491
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 538 WFSTYHVIIWISLALSVTGVFLFLL 612
WF Y IWIS L++ VF+ L+
Sbjct: 203 WFHLYSAPIWISFILTILTVFVILI 227
>U50311-3|AAK68203.1| 589|Caenorhabditis elegans Serpentine
receptor, class sx protein34, isoform b protein.
Length = 589
Score = 29.1 bits (62), Expect = 2.6
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 538 WFSTYHVIIWISLALSVTGVFLFLL 612
WF Y IWIS L++ VF+ L+
Sbjct: 203 WFHLYSAPIWISFILTILTVFVILI 227
>Z92807-5|CAB07265.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 271 GTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFI 444
G + + +GRK + +L + L+ + ++L RF G+S GG LV+ F+
Sbjct: 103 GAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRFFLGLSVGGTLVVVCTFV 160
>AL021482-5|CAA16342.1| 480|Caenorhabditis elegans Hypothetical
protein K11D9.3 protein.
Length = 480
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +1
Query: 271 GTLINSLGRKNGGIVLTLFNVLSWTIVELSSSPILILVARFLAGISGGGLLVMAPIFI 444
G + + +GRK + +L + L+ + ++L RF G+S GG LV+ F+
Sbjct: 103 GAVSDVVGRKPVAVFALSLGILMNFVTGLAPNYQVLLGIRFFLGLSVGGTLVVVCTFV 160
>U28737-2|AAA68272.1| 455|Caenorhabditis elegans Patterned
expression site protein23 protein.
Length = 455
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/83 (22%), Positives = 38/83 (45%)
Frame = +1
Query: 361 SSPILILVARFLAGISGGGLLVMAPIFISXIADDSIRGALASSPLFLYCVGVLLSYIIGW 540
SS ILI + RF+ G G ++V++ + + R + ++Y + Y
Sbjct: 130 SSTILIALCRFIIGTQTGAIIVVSWSLTTELISPRTRFLARAFANWVY-RRQFICYGKTV 188
Query: 541 FSTYHVIIWISLALSVTGVFLFL 609
FS Y + + + A ++ G L++
Sbjct: 189 FSAYRISLHVCAAFTLFGALLYI 211
>AF000262-2|AAN60527.1| 1764|Caenorhabditis elegans Hypothetical
protein C48E7.6 protein.
Length = 1764
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 428 ITSKPPPEIPARNLATRISIGDELSSTMVHDKTLNRVKTIPP 303
IT+ P P++ +SI + S+ ++ D + R KT+PP
Sbjct: 1264 ITNPPDPDVQVVLFPDSVSILNSGSTPLLADILMTRHKTVPP 1305
>Z69384-3|CAA93418.1| 475|Caenorhabditis elegans Hypothetical
protein T11G6.3 protein.
Length = 475
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 433 PIFISXIADDSIRGALASSPLFLYCVGVLLSYIIGWFSTYHVIIWISLALSVTGVFLF 606
P+F S + GAL + + Y +G+ + +G I+ + +ALS VF F
Sbjct: 66 PLFDSEQSATEFLGALDTGFMITYSIGLYICGTLGDHYNPRRILALGMALSAISVFTF 123
>AF026214-3|AAB71312.2| 493|Caenorhabditis elegans Amino acid
transporter protein 3 protein.
Length = 493
Score = 27.5 bits (58), Expect = 8.0
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 310 IVLTLFNVLSWTIV---ELSSSPILILVARFLAGISGGGLLVMAPIFISXIADDSIRGAL 480
I+ TL NV +T + E+ +SP VA A + G PIF++ S G +
Sbjct: 270 IIYTLTNVALYTSITPDEMLASP---AVAVLFAEKNYGWFAFCMPIFVACSTIGSANGVI 326
Query: 481 ASSPLFLYC 507
+S YC
Sbjct: 327 LTSSRLFYC 335
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,349,670
Number of Sequences: 27780
Number of extensions: 303610
Number of successful extensions: 879
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -