Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22e08
         (421 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010070-1|AAQ22539.1| 1038|Drosophila melanogaster LD13052p pro...    28   5.8  
AE014298-1590|AAF48025.3| 1028|Drosophila melanogaster CG11759-P...    28   5.8  

>BT010070-1|AAQ22539.1| 1038|Drosophila melanogaster LD13052p
           protein.
          Length = 1038

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 96  HHNHCRFSLPQINCHFAMTKNSNSQGSNTSAANAI--ALGAMTVVA 227
           H +H R S    +   AMT ++ S G +T A+N +  AL A T  A
Sbjct: 215 HTSHTRSSARSHSSVAAMTSSTGSGGGSTGASNGVSNALSAATPTA 260


>AE014298-1590|AAF48025.3| 1028|Drosophila melanogaster CG11759-PA
           protein.
          Length = 1028

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 96  HHNHCRFSLPQINCHFAMTKNSNSQGSNTSAANAI--ALGAMTVVA 227
           H +H R S    +   AMT ++ S G +T A+N +  AL A T  A
Sbjct: 215 HTSHTRSSARSHSSVAAMTSSTGSGGGSTGASNGVSNALSAATPTA 260


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,965,315
Number of Sequences: 53049
Number of extensions: 405332
Number of successful extensions: 1049
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)