Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22e04
         (313 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0535 + 4208410-4208661,4209529-4209627,4210125-4210265,421...    32   0.082
11_05_0004 - 18269416-18269473,18270319-18270509,18271061-182720...    29   0.58 
02_01_0485 + 3487578-3487635,3488281-3488399,3488600-3488698,348...    27   2.3  
11_01_0292 - 2200714-2201478,2202691-2203395                           26   5.4  
07_03_1263 + 25279899-25279985,25280263-25282372,25282700-252827...    26   7.2  
03_02_0948 - 12645972-12646010,12646612-12646750,12646846-126470...    26   7.2  
02_04_0054 + 19279579-19280772                                         25   9.5  
01_01_0670 - 5131007-5131873                                           25   9.5  

>12_01_0535 +
           4208410-4208661,4209529-4209627,4210125-4210265,
           4210378-4210560,4210664-4210821,4210905-4211004,
           4211085-4211196,4211241-4211419,4211489-4211674,
           4211762-4211929
          Length = 525

 Score = 32.3 bits (70), Expect = 0.082
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +1

Query: 1   VYYEMPPRLQKQMKQMEEHLKKYPEHYPLNQH 96
           VY E+P  L++Q + + + +KK+P  YP + H
Sbjct: 493 VYDEVPSNLREQERLLRDTIKKHPADYPADVH 524


>11_05_0004 -
           18269416-18269473,18270319-18270509,18271061-18272004,
           18272083-18272254,18272332-18272407,18272498-18272617,
           18272795-18272959,18273048-18273138,18273673-18273757,
           18273873-18274043,18274151-18274207,18274290-18274385,
           18275223-18275365,18275464-18275530
          Length = 811

 Score = 29.5 bits (63), Expect = 0.58
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 27  SKTNEANGGTSKEVSRALPAQSTRERLNNYCR 122
           SK  E NG T +EV  A  A   R R++++C+
Sbjct: 120 SKQQEDNGSTEEEVPSAPAAGHVRPRVHSFCK 151


>02_01_0485 +
           3487578-3487635,3488281-3488399,3488600-3488698,
           3488795-3488851,3488954-3489109,3489227-3489311,
           3489489-3489579,3489693-3489857,3489923-3490045,
           3490244-3490319,3490486-3490633,3490769-3491934,
           3492041-3492231,3492321-3492513
          Length = 908

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +1

Query: 4   YYEMPPRLQKQMKQMEEHLKKYPEHYPLNQHE 99
           + E  P+LQ Q +Q E H ++ P+H  + Q +
Sbjct: 524 FNEQKPQLQPQQQQQESH-QQQPQHQQMQQQK 554


>11_01_0292 - 2200714-2201478,2202691-2203395
          Length = 489

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 145 FMVYCLFGVFILFTV 189
           F  YCL G++ILFTV
Sbjct: 465 FWGYCLMGLYILFTV 479


>07_03_1263 +
           25279899-25279985,25280263-25282372,25282700-25282793,
           25283178-25283314,25283419-25283454,25283602-25283642,
           25284036-25284125,25284229-25284284,25284947-25285030,
           25285072-25285150
          Length = 937

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +3

Query: 141 YFYGLLSFRCFYSIYCLNIL 200
           +FY ++  RC + ++C N+L
Sbjct: 875 FFYLIIQLRCMFLVFCDNLL 894


>03_02_0948 -
           12645972-12646010,12646612-12646750,12646846-12647090,
           12647184-12647505,12647781-12648005,12648185-12648351,
           12648428-12648544,12648989-12649162,12649372-12649467,
           12649624-12649840,12650267-12650385,12650478-12650670,
           12651212-12651363,12651485-12651611,12651731-12651828
          Length = 809

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 22  RLQKQMKQMEEHLKKYPEHYPLNQ 93
           RLQ  + + EEHL K P   P +Q
Sbjct: 203 RLQSVLTKAEEHLSKLPADTPYSQ 226


>02_04_0054 + 19279579-19280772
          Length = 397

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +1

Query: 58  LKKYPEHYPLNQHESD 105
           L++YP+H+ L+Q E D
Sbjct: 178 LRRYPDHFALDQPEGD 193


>01_01_0670 - 5131007-5131873
          Length = 288

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
 Frame = +3

Query: 15  ATQASKTNEANGGTSKEVSRAL-----PAQSTRERLNNYCRYSHC*NYFYGLL 158
           A+ A+      GG  K   R +     PA   R    + CR+S C  +FY +L
Sbjct: 13  ASAAAAAGNGAGGPPKMYQRPIYRPQAPAAKRRRGGRSSCRFSCCCCFFYAVL 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,937,454
Number of Sequences: 37544
Number of extensions: 77553
Number of successful extensions: 191
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 191
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 388087168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)