Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt22e04
(313 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z14093-1|CAA78475.1| 445|Homo sapiens branched chain decarboxyl... 42 4e-04
S62652-1|AAB20222.2| 443|Homo sapiens branched-chain alpha-keto... 42 4e-04
S38309-1|AAB19267.1| 56|Homo sapiens branched-chain alpha-keto... 42 4e-04
M22221-1|AAA35590.1| 378|Homo sapiens protein ( Human branched-... 42 4e-04
J04474-1|AAB59549.1| 444|Homo sapiens branched-chain alpha-keto... 42 4e-04
BC023983-1|AAH23983.1| 445|Homo sapiens branched chain keto aci... 42 4e-04
BC008933-1|AAH08933.1| 445|Homo sapiens branched chain keto aci... 42 4e-04
BC007878-1|AAH07878.1| 445|Homo sapiens branched chain keto aci... 42 4e-04
AK127598-1|BAC87051.1| 479|Homo sapiens 1.2.4.4). protein. 42 4e-04
AB209828-1|BAD93065.1| 444|Homo sapiens branched chain keto aci... 42 4e-04
BC128510-1|AAI28511.1| 1203|Homo sapiens KIAA0999 protein protein. 29 2.9
BC022089-1|AAH22089.1| 971|Homo sapiens DIS3 mitotic control ho... 29 3.8
AK095407-1|BAC04542.1| 750|Homo sapiens protein ( Homo sapiens ... 29 3.8
AB075835-1|BAB85541.1| 947|Homo sapiens KIAA1955 protein protein. 29 3.8
BC051768-1|AAH51768.1| 1327|Homo sapiens patatin-like phospholip... 28 6.7
BC050553-1|AAH50553.1| 1327|Homo sapiens patatin-like phospholip... 28 6.7
BC038229-1|AAH38229.1| 1332|Homo sapiens PNPLA6 protein protein. 28 6.7
AL954342-3|CAH72739.1| 731|Homo sapiens potassium intermediate/... 28 6.7
AL606500-5|CAH71911.1| 731|Homo sapiens potassium intermediate/... 28 6.7
AL390204-3|CAH71151.1| 731|Homo sapiens potassium intermediate/... 28 6.7
AJ004832-1|CAA06164.1| 1327|Homo sapiens neuropathy target ester... 28 6.7
AF031815-1|AAC26099.1| 731|Homo sapiens calcium-activated potas... 28 6.7
BC121018-1|AAI21019.1| 218|Homo sapiens UPF3B protein protein. 27 8.8
BC121017-1|AAI21018.1| 470|Homo sapiens UPF3 regulator of nonse... 27 8.8
AY013251-1|AAG48511.1| 470|Homo sapiens hUPF3B protein. 27 8.8
AF318576-1|AAG60691.1| 483|Homo sapiens UPF3X protein. 27 8.8
>Z14093-1|CAA78475.1| 445|Homo sapiens branched chain decarboxylase
alpha subunit protein.
Length = 445
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 1 VYYEMPPRLQKQMKQMEEHLKKYPEHYPLNQHE 99
VY EMP +L+KQ + + HL+ Y EHYPL+ +
Sbjct: 412 VYQEMPAQLRKQQESLARHLQTYGEHYPLDHFD 444
>S62652-1|AAB20222.2| 443|Homo sapiens branched-chain alpha-keto
acid dehydrogenase E1 alpha subunit protein.
Length = 443
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 1 VYYEMPPRLQKQMKQMEEHLKKYPEHYPLNQHE 99
VY EMP +L+KQ + + HL+ Y EHYPL+ +
Sbjct: 410 VYQEMPAQLRKQQESLARHLQTYGEHYPLDHFD 442
>S38309-1|AAB19267.1| 56|Homo sapiens branched-chain alpha-keto
acid dehydrog> protein.
Length = 56
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 1 VYYEMPPRLQKQMKQMEEHLKKYPEHYPLNQHE 99
VY EMP +L+KQ + + HL+ Y EHYPL+ +
Sbjct: 23 VYQEMPAQLRKQQESLARHLQTYGEHYPLDHFD 55
>M22221-1|AAA35590.1| 378|Homo sapiens protein ( Human
branched-chain alpha-keto acid dehydrogenase E1-alpha
subunit (BCKDH) mRNA, partial cds. ).
Length = 378
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 1 VYYEMPPRLQKQMKQMEEHLKKYPEHYPLNQHE 99
VY EMP +L+KQ + + HL+ Y EHYPL+ +
Sbjct: 345 VYQEMPAQLRKQQESLARHLQTYGEHYPLDHFD 377
>J04474-1|AAB59549.1| 444|Homo sapiens branched-chain alpha-keto
acid dehydrogenase protein.
Length = 444
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 1 VYYEMPPRLQKQMKQMEEHLKKYPEHYPLNQHE 99
VY EMP +L+KQ + + HL+ Y EHYPL+ +
Sbjct: 411 VYQEMPAQLRKQQESLARHLQTYGEHYPLDHFD 443
>BC023983-1|AAH23983.1| 445|Homo sapiens branched chain keto acid
dehydrogenase E1, alpha polypeptide protein.
Length = 445
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 1 VYYEMPPRLQKQMKQMEEHLKKYPEHYPLNQHE 99
VY EMP +L+KQ + + HL+ Y EHYPL+ +
Sbjct: 412 VYQEMPAQLRKQQESLARHLQTYGEHYPLDHFD 444
>BC008933-1|AAH08933.1| 445|Homo sapiens branched chain keto acid
dehydrogenase E1, alpha polypeptide protein.
Length = 445
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 1 VYYEMPPRLQKQMKQMEEHLKKYPEHYPLNQHE 99
VY EMP +L+KQ + + HL+ Y EHYPL+ +
Sbjct: 412 VYQEMPAQLRKQQESLARHLQTYGEHYPLDHFD 444
>BC007878-1|AAH07878.1| 445|Homo sapiens branched chain keto acid
dehydrogenase E1, alpha polypeptide protein.
Length = 445
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 1 VYYEMPPRLQKQMKQMEEHLKKYPEHYPLNQHE 99
VY EMP +L+KQ + + HL+ Y EHYPL+ +
Sbjct: 412 VYQEMPAQLRKQQESLARHLQTYGEHYPLDHFD 444
>AK127598-1|BAC87051.1| 479|Homo sapiens 1.2.4.4). protein.
Length = 479
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 1 VYYEMPPRLQKQMKQMEEHLKKYPEHYPLNQHE 99
VY EMP +L+KQ + + HL+ Y EHYPL+ +
Sbjct: 446 VYQEMPAQLRKQQESLARHLQTYGEHYPLDHFD 478
>AB209828-1|BAD93065.1| 444|Homo sapiens branched chain keto acid
dehydrogenase E1, alpha polypeptide variant protein.
Length = 444
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 1 VYYEMPPRLQKQMKQMEEHLKKYPEHYPLNQHE 99
VY EMP +L+KQ + + HL+ Y EHYPL+ +
Sbjct: 411 VYQEMPAQLRKQQESLARHLQTYGEHYPLDHFD 443
>BC128510-1|AAI28511.1| 1203|Homo sapiens KIAA0999 protein protein.
Length = 1203
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +1
Query: 10 EMPPRLQKQMKQMEEHLKKYPEHYPLNQHESD*ITTADIHI 132
E+PP LQ+Q+ Q + +P H +QH S + +H+
Sbjct: 516 EIPPDLQRQLGQQPFRSRVWPPHLVPDQHRSTYKDSNTLHL 556
>BC022089-1|AAH22089.1| 971|Homo sapiens DIS3 mitotic control
homolog (S. cerevisiae)-like protein.
Length = 971
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 22 RLQKQMKQMEEHLKKYPEHYPLNQHES 102
R +++ + E H K+YPEH PL E+
Sbjct: 127 RRERENESQESHGKEYPEHLPLEVLEA 153
>AK095407-1|BAC04542.1| 750|Homo sapiens protein ( Homo sapiens
cDNA FLJ38088 fis, clone CTONG2020031, weakly similar to
Mitotic control protein dis3. ).
Length = 750
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 22 RLQKQMKQMEEHLKKYPEHYPLNQHES 102
R +++ + E H K+YPEH PL E+
Sbjct: 210 RRERENESQESHGKEYPEHLPLEVLEA 236
>AB075835-1|BAB85541.1| 947|Homo sapiens KIAA1955 protein protein.
Length = 947
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 22 RLQKQMKQMEEHLKKYPEHYPLNQHES 102
R +++ + E H K+YPEH PL E+
Sbjct: 103 RRERENESQESHGKEYPEHLPLEVLEA 129
>BC051768-1|AAH51768.1| 1327|Homo sapiens patatin-like phospholipase
domain containing 6 protein.
Length = 1327
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 27 SKTNEANGGTSKEVSRALPAQSTRERLNNYCRYSHC 134
S EA+GG+ +R P Q RE+ C YS+C
Sbjct: 400 SLQEEASGGSLAAPART-PTQEPREQPAGACEYSYC 434
>BC050553-1|AAH50553.1| 1327|Homo sapiens patatin-like phospholipase
domain containing 6 protein.
Length = 1327
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 27 SKTNEANGGTSKEVSRALPAQSTRERLNNYCRYSHC 134
S EA+GG+ +R P Q RE+ C YS+C
Sbjct: 400 SLQEEASGGSLAAPART-PTQEPREQPAGACEYSYC 434
>BC038229-1|AAH38229.1| 1332|Homo sapiens PNPLA6 protein protein.
Length = 1332
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 27 SKTNEANGGTSKEVSRALPAQSTRERLNNYCRYSHC 134
S EA+GG+ +R P Q RE+ C YS+C
Sbjct: 406 SLQEEASGGSLAAPART-PTQEPREQPAGACEYSYC 440
>AL954342-3|CAH72739.1| 731|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 731
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 16 PPRLQKQMKQMEEHLKKYPEHYPLNQ 93
PP+LQ+Q +Q ++ ++ P H PL+Q
Sbjct: 63 PPQLQQQQQQQQQQQQQQPPH-PLSQ 87
>AL606500-5|CAH71911.1| 731|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 731
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 16 PPRLQKQMKQMEEHLKKYPEHYPLNQ 93
PP+LQ+Q +Q ++ ++ P H PL+Q
Sbjct: 63 PPQLQQQQQQQQQQQQQQPPH-PLSQ 87
>AL390204-3|CAH71151.1| 731|Homo sapiens potassium
intermediate/small conductance calcium-activated
channel, subfamily N protein.
Length = 731
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 16 PPRLQKQMKQMEEHLKKYPEHYPLNQ 93
PP+LQ+Q +Q ++ ++ P H PL+Q
Sbjct: 63 PPQLQQQQQQQQQQQQQQPPH-PLSQ 87
>AJ004832-1|CAA06164.1| 1327|Homo sapiens neuropathy target esterase
protein.
Length = 1327
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 27 SKTNEANGGTSKEVSRALPAQSTRERLNNYCRYSHC 134
S EA+GG+ +R P Q RE+ C YS+C
Sbjct: 400 SLQEEASGGSLAAPART-PTQEPREQPAGACEYSYC 434
>AF031815-1|AAC26099.1| 731|Homo sapiens calcium-activated
potassium channel protein.
Length = 731
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 16 PPRLQKQMKQMEEHLKKYPEHYPLNQ 93
PP+LQ+Q +Q ++ ++ P H PL+Q
Sbjct: 63 PPQLQQQQQQQQQQQQQQPPH-PLSQ 87
>BC121018-1|AAI21019.1| 218|Homo sapiens UPF3B protein protein.
Length = 218
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 1 VYYEMPPRLQKQMKQMEEHLKKYPEH 78
V +PP L K+ Q++EHL+ PEH
Sbjct: 54 VIRRLPPTLTKE--QLQEHLQPMPEH 77
>BC121017-1|AAI21018.1| 470|Homo sapiens UPF3 regulator of nonsense
transcripts homolog B (yeast) protein.
Length = 470
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 1 VYYEMPPRLQKQMKQMEEHLKKYPEH 78
V +PP L K+ Q++EHL+ PEH
Sbjct: 54 VIRRLPPTLTKE--QLQEHLQPMPEH 77
>AY013251-1|AAG48511.1| 470|Homo sapiens hUPF3B protein.
Length = 470
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 1 VYYEMPPRLQKQMKQMEEHLKKYPEH 78
V +PP L K+ Q++EHL+ PEH
Sbjct: 54 VIRRLPPTLTKE--QLQEHLQPMPEH 77
>AF318576-1|AAG60691.1| 483|Homo sapiens UPF3X protein.
Length = 483
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 1 VYYEMPPRLQKQMKQMEEHLKKYPEH 78
V +PP L K+ Q++EHL+ PEH
Sbjct: 54 VIRRLPPTLTKE--QLQEHLQPMPEH 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,519,991
Number of Sequences: 237096
Number of extensions: 500940
Number of successful extensions: 1904
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1904
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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