Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22e04
         (313 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021480-5|CAJ21557.1|  432|Caenorhabditis elegans Hypothetical ...    38   0.002
AL021480-4|CAA16329.2|  431|Caenorhabditis elegans Hypothetical ...    38   0.002
AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical...    28   1.2  
Z72509-2|CAA96646.1|  520|Caenorhabditis elegans Hypothetical pr...    28   1.6  
Z68315-2|CAA92668.1|  535|Caenorhabditis elegans Hypothetical pr...    28   1.6  
Z78545-2|CAB01766.1|  596|Caenorhabditis elegans Hypothetical pr...    27   2.1  
Z46787-5|CAA86743.1|  409|Caenorhabditis elegans Hypothetical pr...    27   2.8  
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr...    26   4.8  
Z67879-3|CAA91789.2|  278|Caenorhabditis elegans Hypothetical pr...    26   4.8  
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re...    26   4.8  
AL161712-10|CAC35900.1|  533|Caenorhabditis elegans Hypothetical...    26   4.8  
AL034488-8|CAE46690.1|  395|Caenorhabditis elegans Hypothetical ...    26   4.8  
AL034488-7|CAA22452.1|  396|Caenorhabditis elegans Hypothetical ...    26   4.8  
Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical pr...    26   6.4  
Z68014-9|CAI79184.1|  125|Caenorhabditis elegans Hypothetical pr...    25   8.4  
AC006807-3|AAK84617.1|  883|Caenorhabditis elegans Hypothetical ...    25   8.4  

>AL021480-5|CAJ21557.1|  432|Caenorhabditis elegans Hypothetical
           protein Y39E4A.3b protein.
          Length = 432

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +1

Query: 1   VYYEMPPRLQKQMKQMEEHLKKYPEHYPL 87
           VY E+P RL++Q  +++ H+ +Y EHYP+
Sbjct: 396 VYDELPLRLRRQRDELDAHVAEYKEHYPM 424


>AL021480-4|CAA16329.2|  431|Caenorhabditis elegans Hypothetical
           protein Y39E4A.3a protein.
          Length = 431

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 13/29 (44%), Positives = 22/29 (75%)
 Frame = +1

Query: 1   VYYEMPPRLQKQMKQMEEHLKKYPEHYPL 87
           VY E+P RL++Q  +++ H+ +Y EHYP+
Sbjct: 395 VYDELPLRLRRQRDELDAHVAEYKEHYPM 423


>AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical
           protein Y37A1B.11 protein.
          Length = 691

 Score = 28.3 bits (60), Expect = 1.2
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = +1

Query: 52  EHLKKYPEHYPLNQHESD*ITTADIHIVKIIFMVYCLFGVFIL 180
           E ++  PE   +++ E D +T  +   + I+F+VY  FG F+L
Sbjct: 284 EKIENEPETSEVSEEEDD-LTETEATSLFILFLVYIAFGGFML 325


>Z72509-2|CAA96646.1|  520|Caenorhabditis elegans Hypothetical
           protein F32G8.2 protein.
          Length = 520

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 45  NGGTSKEVSRALPAQSTRERLNNYCRY 125
           N G  K+   A   Q TRE+L N+C++
Sbjct: 40  NVGFEKKYEYAYTMQDTREQLGNFCKF 66


>Z68315-2|CAA92668.1|  535|Caenorhabditis elegans Hypothetical
           protein F28C6.2 protein.
          Length = 535

 Score = 27.9 bits (59), Expect = 1.6
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = +1

Query: 22  RLQKQMKQMEEHLKKYPEHYPLNQHE 99
           +L KQM+++EE+  +  EH  ++QH+
Sbjct: 472 KLAKQMEEVEENKSQRGEHQQIHQHQ 497


>Z78545-2|CAB01766.1|  596|Caenorhabditis elegans Hypothetical
           protein M03B6.2 protein.
          Length = 596

 Score = 27.5 bits (58), Expect = 2.1
 Identities = 10/36 (27%), Positives = 23/36 (63%)
 Frame = +1

Query: 22  RLQKQMKQMEEHLKKYPEHYPLNQHESD*ITTADIH 129
           ++ K ++  EEH +K PE   L++H +  +++ ++H
Sbjct: 230 KVAKVLEDYEEHKEKVPESPLLSKHNTPFLSSLELH 265


>Z46787-5|CAA86743.1|  409|Caenorhabditis elegans Hypothetical
           protein C16C10.5 protein.
          Length = 409

 Score = 27.1 bits (57), Expect = 2.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 117 CRYSHC*NYFYGLLSFRCFY 176
           CR  +  NYFY LL+ +CF+
Sbjct: 20  CRKVNQLNYFYQLLNLKCFF 39


>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
            F29D11.1 protein.
          Length = 4753

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 156  LSFRCFYSIYCLNILQ 203
            L FRC +S  CLNILQ
Sbjct: 4004 LRFRCAHSRLCLNILQ 4019


>Z67879-3|CAA91789.2|  278|Caenorhabditis elegans Hypothetical
           protein C05E7.4 protein.
          Length = 278

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 141 YFYGLLSFRCFYSIYC 188
           Y   L +F CFYS+YC
Sbjct: 117 YITVLAAFDCFYSVYC 132


>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
            protein protein.
          Length = 4753

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +3

Query: 156  LSFRCFYSIYCLNILQ 203
            L FRC +S  CLNILQ
Sbjct: 4004 LRFRCAHSRLCLNILQ 4019


>AL161712-10|CAC35900.1|  533|Caenorhabditis elegans Hypothetical
           protein Y66D12A.13 protein.
          Length = 533

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = +1

Query: 124 IHIVKIIFMVYCLFGVFILF 183
           +H + + F++ C+FG+F ++
Sbjct: 383 MHFITVSFIMCCMFGIFFIY 402


>AL034488-8|CAE46690.1|  395|Caenorhabditis elegans Hypothetical
           protein Y54G11A.8b protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = +1

Query: 25  LQKQMKQMEEHLKKY 69
           +++QMK MEEH+KK+
Sbjct: 203 VRRQMKVMEEHMKKF 217


>AL034488-7|CAA22452.1|  396|Caenorhabditis elegans Hypothetical
           protein Y54G11A.8a protein.
          Length = 396

 Score = 26.2 bits (55), Expect = 4.8
 Identities = 9/15 (60%), Positives = 14/15 (93%)
 Frame = +1

Query: 25  LQKQMKQMEEHLKKY 69
           +++QMK MEEH+KK+
Sbjct: 204 VRRQMKVMEEHMKKF 218


>Z68159-7|CAA92286.1|  604|Caenorhabditis elegans Hypothetical
           protein C33D9.8 protein.
          Length = 604

 Score = 25.8 bits (54), Expect = 6.4
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 25  LQKQMKQMEEHLKKYPE 75
           LQK  K++EE LKKY +
Sbjct: 303 LQKDTKELEEELKKYKD 319


>Z68014-9|CAI79184.1|  125|Caenorhabditis elegans Hypothetical
           protein W04G3.12 protein.
          Length = 125

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +1

Query: 52  EHLKKYPEHYPLNQHESD 105
           E +++YP  YP ++ ESD
Sbjct: 62  ESIRRYPPFYPFDRRESD 79


>AC006807-3|AAK84617.1|  883|Caenorhabditis elegans Hypothetical
           protein Y58A7A.3 protein.
          Length = 883

 Score = 25.4 bits (53), Expect = 8.4
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 4   YYEMPPRLQKQMKQMEEHLKKYPEH 78
           YY  PPR +K  KQ  E  K    H
Sbjct: 720 YYSYPPRYRKWEKQYHEENKDTDRH 744


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,692,605
Number of Sequences: 27780
Number of extensions: 88972
Number of successful extensions: 310
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 344570176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)