Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt22d04
(627 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.02c |||translation elongation factor EF-1 gamma subunit... 136 2e-33
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 28 0.96
SPAC227.15 |||protein phosphatase regulatory subunit Reg1 |Schiz... 27 1.7
SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces p... 27 1.7
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 27 2.2
SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|ch... 27 2.9
SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces... 26 3.9
SPBC3F6.02c |||3 beta-hydroxysteroid dehydrogenase/delta 5-->4-i... 26 5.1
SPCC4G3.07c |phf1|swp1, saf50|PHD finger containing protein Phf1... 26 5.1
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 6.8
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 25 9.0
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 25 9.0
SPAC25B8.08 |||conserved fungal family|Schizosaccharomyces pombe... 25 9.0
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 25 9.0
SPAC9E9.15 |||CIA30 family protein|Schizosaccharomyces pombe|chr... 25 9.0
>SPAC29A4.02c |||translation elongation factor EF-1 gamma subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 409
Score = 136 bits (330), Expect = 2e-33
Identities = 68/163 (41%), Positives = 106/163 (65%), Gaps = 4/163 (2%)
Frame = +3
Query: 6 KDPFDSMPKGTFNMDDFKRVYSNED-EAKSIPYFWEKFDPENYSIWYAEYKYPEELAK-V 179
K P S P G+F+++++KRVYSN+D + ++P+F+E FDPENYS+W +Y YPE+L + V
Sbjct: 252 KHPLASAPNGSFDIEEYKRVYSNQDTRSGALPWFFEHFDPENYSVWKVDYSYPEDLKQPV 311
Query: 180 FMSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELV--FPLSSDWQVD 353
FM+ NLI G FQRL+ RK F + GE+ ++TI+G +V +G + V F ++ DW
Sbjct: 312 FMTNNLIGGFFQRLEASRKYIFGCCVVIGENGDNTITGAFVIKGHDYVPAFDVAPDW--- 368
Query: 354 YESYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 482
SY + KLD + E K ++D ++W+ +GR+ GK+ K
Sbjct: 369 -GSYTFTKLDINKPEDKAFIEDAWAWD-KPIEGREVADGKVCK 409
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 28.3 bits (60), Expect = 0.96
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +1
Query: 412 SRTTSRGTEPTKTVESSTRARYSSECRPTSS 504
S TTS T + T+ SSTR+ +SE TSS
Sbjct: 987 SSTTSGLTSSSSTIPSSTRSESNSESASTSS 1017
>SPAC227.15 |||protein phosphatase regulatory subunit Reg1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 873
Score = 27.5 bits (58), Expect = 1.7
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 345 QVDYESYDWKKLD 383
QVDY SYDWK+ D
Sbjct: 298 QVDYLSYDWKETD 310
>SPCC1020.13c ||SPCC14G10.05|phospholipase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 669
Score = 27.5 bits (58), Expect = 1.7
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +1
Query: 313 RSSCSRCRLIGRWTTSPTTGRNWILRARRPRNLSRTTSRGTEPTKTVESSTR 468
R S S R+I T P R++ ++ +N T EP +TVE TR
Sbjct: 531 RKSSSILRMISHSNTDPVELRSYNQSLQQNKNNEPTAVVPLEPEQTVELETR 582
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 27.1 bits (57), Expect = 2.2
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = -3
Query: 304 HTHTPEMVELLSS---PNRQTDAKACLRILSNLWNIPVIRL 191
+ H P V+ L+ PN + CL IL WN PV+ L
Sbjct: 80 YPHDPPKVKCLNKIYHPNIDIEGNVCLNILRQDWN-PVLNL 119
>SPCC794.04c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 547
Score = 26.6 bits (56), Expect = 2.9
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = -3
Query: 571 IYI*MFLFCKVFYSYCMKCVYIGWTLVGIHLNILPWLNFLPSLSVPFHEK 422
+YI M + +FY Y +G ++GI + IL L P + V + +
Sbjct: 355 LYICMVGYPLIFYQYGFNAGEVGLAILGILVGILLGLALTPIIYVHYRRR 404
>SPBC3B8.10c |||NLI interacting factor family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 476
Score = 26.2 bits (55), Expect = 3.9
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +1
Query: 31 KVPSTWMISS--VSTPTKTKLNLFLTSGRSLTPRTIPFGMLNTNTPRNSLKCS*AVTLLR 204
K+PS++ I + + +P+ ++L + +L IP +LN+ PR +L TL+
Sbjct: 260 KLPSSFTIVNDPLKSPSSSRLRI---RNITLCADKIPRPLLNSKLPRKTLVLDLDETLIH 316
Query: 205 VCSRG 219
SRG
Sbjct: 317 SVSRG 321
>SPBC3F6.02c |||3 beta-hydroxysteroid dehydrogenase/delta
5-->4-isomerase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 340
Score = 25.8 bits (54), Expect = 5.1
Identities = 19/80 (23%), Positives = 33/80 (41%)
Frame = +2
Query: 380 GSFERGDQETCPGLLLVERNRQRR*KVQPGQDIQVNADQRPANVYTFHTITIKNFTKKKH 559
G F GD++ PG+L V +N Q K Q G ++ + N H + + N
Sbjct: 172 GLFGPGDRQLVPGMLSVLKNGQT--KFQLGDNLNLFDFTYIENAAYAHLLAMDNLLSSNP 229
Query: 560 SNVNRWMLAIFGTVLNLYNF 619
+ + G V+ ++F
Sbjct: 230 TANGQVFFITNGQVIYFWDF 249
>SPCC4G3.07c |phf1|swp1, saf50|PHD finger containing protein
Phf1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 461
Score = 25.8 bits (54), Expect = 5.1
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +1
Query: 103 SGRSLTPRTIPFGMLNTNTPRNSLKCS*AVTLLRVCSRG*TKCANRLSHPSAC 261
SGR + R + + T R S K VTL VC RG + +NR+ C
Sbjct: 163 SGRKIQ-RPVAYNPNATALKRKSRKVD-MVTLCSVCQRGHSPLSNRIVFCDGC 213
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 6.8
Identities = 40/176 (22%), Positives = 60/176 (34%), Gaps = 6/176 (3%)
Frame = +1
Query: 1 SPRTPSTLCLKVPSTWMISSVSTPTKTKLNLFLTSGRSLTPRTIPFGMLNTNT---PRNS 171
S T T +P T SS+STP + TS S+ +TN+ P S
Sbjct: 110 STSTSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPTTS 169
Query: 172 LKCS*AVTLLRV--CSRG*TKCANRLSHPSACLVKTTIPPSLECGCGAERSSCSRCRLIG 345
C+ + ++ S T + S IPP+ S
Sbjct: 170 TSCTTSTSIPPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSC 229
Query: 346 RWTTS-PTTGRNWILRARRPRNLSRTTSRGTEPTKTVESSTRARYSSECRPTSSQC 510
+TS PT G + + P +TS + P +S+ SS TS+ C
Sbjct: 230 TTSTSIPTGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPTTSTSC 285
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 25.0 bits (52), Expect = 9.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +3
Query: 78 DEAKSIPYFWEKFDPENYSIW 140
D++K P FW++++ YSI+
Sbjct: 242 DDSKESPDFWKEYNALRYSIY 262
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/41 (29%), Positives = 17/41 (41%)
Frame = +1
Query: 28 LKVPSTWMISSVSTPTKTKLNLFLTSGRSLTPRTIPFGMLN 150
+++ W + P K LN+ L L R P G LN
Sbjct: 326 IEISVRWYVLQNPFPNKLNLNMLLKIPGRLQDRRTPLGELN 366
>SPAC25B8.08 |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 590
Score = 25.0 bits (52), Expect = 9.0
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 373 RNWILRARRPRNLSRTTSRGTEPTKTVESSTR 468
R+W L RRP N + T+ R T P+ + S T+
Sbjct: 291 RSWNLLRRRPTNDASTSPRST-PSASPRSITK 321
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 25.0 bits (52), Expect = 9.0
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 49 MISSVSTPTKTKLNLFLTSGRSLTPRTIPFGMLNTNT 159
+++ +TP + +L SGRSL T G+ N +T
Sbjct: 843 LVTDTTTPYLSDFSLVNESGRSLLHLTAACGLSNAST 879
>SPAC9E9.15 |||CIA30 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 25.0 bits (52), Expect = 9.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 51 DFKRVYSNEDEAKSIPY 101
DF +YS ED+ SIP+
Sbjct: 117 DFTPIYSKEDQVVSIPF 133
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,894,392
Number of Sequences: 5004
Number of extensions: 65908
Number of successful extensions: 243
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 277683324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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