Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt22d04
(627 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 246 1e-65
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 246 1e-65
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 246 1e-65
AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 32 0.29
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 31 0.67
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 31 0.67
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 30 1.2
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 30 1.6
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 30 1.6
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 29 2.1
U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like ... 29 2.7
AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to SU... 29 2.7
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 3.6
Z70754-3|CAA94773.1| 293|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 28 6.3
U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical pr... 28 6.3
U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical pr... 27 8.3
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 27 8.3
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 246 bits (601), Expect = 1e-65
Identities = 109/161 (67%), Positives = 127/161 (78%), Gaps = 1/161 (0%)
Frame = +3
Query: 3 SKDPFDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKV 179
SKDPF MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L
Sbjct: 206 SKDPFQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLA 265
Query: 180 FMSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYE 359
FMSCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS DWQVDYE
Sbjct: 266 FMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYE 325
Query: 360 SYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 482
SY W KLD S+ TKK V +Y W G D G+KFNQGKIFK
Sbjct: 326 SYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 365
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 246 bits (601), Expect = 1e-65
Identities = 109/161 (67%), Positives = 127/161 (78%), Gaps = 1/161 (0%)
Frame = +3
Query: 3 SKDPFDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKV 179
SKDPF MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L
Sbjct: 214 SKDPFQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLA 273
Query: 180 FMSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYE 359
FMSCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS DWQVDYE
Sbjct: 274 FMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYE 333
Query: 360 SYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 482
SY W KLD S+ TKK V +Y W G D G+KFNQGKIFK
Sbjct: 334 SYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 373
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 246 bits (601), Expect = 1e-65
Identities = 109/161 (67%), Positives = 127/161 (78%), Gaps = 1/161 (0%)
Frame = +3
Query: 3 SKDPFDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEELAKV 179
SKDPF MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L
Sbjct: 239 SKDPFQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDLTLA 298
Query: 180 FMSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYE 359
FMSCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L F LS DWQVDYE
Sbjct: 299 FMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLAFELSPDWQVDYE 358
Query: 360 SYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK 482
SY W KLD S+ TKK V +Y W G D G+KFNQGKIFK
Sbjct: 359 SYTWTKLDAKSDATKKEVNEYLMWEG-DFGGKKFNQGKIFK 398
>AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical
protein K02F6.2 protein.
Length = 361
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/82 (24%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +3
Query: 48 DDFKRVYSNEDEAKSIPYFWEKFDPENYSIW-YAEYKYPEELAKVFMSCNLITGMFQRLD 224
D+ V+ N+ + K P + KF PENY +W Y +E ++ ++S + ++ +
Sbjct: 42 DELLAVF-NKFKGKKFPRKFPKFGPENYKVWCYVNELDKDETSEYYISRTEFSKLYAG-N 99
Query: 225 KMRKQAFASVCLFGEDNNSTIS 290
+RK A+ + E+ N +++
Sbjct: 100 VVRKVEDATHIVLPENENGSVT 121
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 319 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 209
S F H TP+++ LL N T C I+ +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 31.1 bits (67), Expect = 0.67
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -3
Query: 319 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 209
S F H TP+++ LL N T C I+ +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +3
Query: 327 PLSSDWQVDYESYDWKKL 380
PL D QVD+++Y+W+KL
Sbjct: 2672 PLGPDGQVDFQNYEWQKL 2689
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 322 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 209
T +P T + + + PN D CL IL N W+
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 322 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 209
T +P T + + + PN D CL IL N W+
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 418 TTSRGTEPTKTVESSTRARYSSECRPTSS 504
TT+ T PT T E ST A+ S+ +PT++
Sbjct: 218 TTTTSTFPTSTTEKSTTAQPSTTTKPTTT 246
>U23412-4|AAK21468.3| 697|Caenorhabditis elegans Ubiquitin-like
protease protein 1 protein.
Length = 697
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 485 NADQRPANVYTFHTITIKNFTKKKHSNVNRW 577
N D + +Y F+T N K +++V RW
Sbjct: 534 NGDSKYPKIYAFNTFFYSNIVSKGYASVKRW 564
>AB095020-1|BAC22612.1| 697|Caenorhabditis elegans similar to
SUMO-1-specific protease protein.
Length = 697
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 485 NADQRPANVYTFHTITIKNFTKKKHSNVNRW 577
N D + +Y F+T N K +++V RW
Sbjct: 534 NGDSKYPKIYAFNTFFYSNIVSKGYASVKRW 564
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.7 bits (61), Expect = 3.6
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 295 CGCGAERSSCSRCRLIGRWTTSPTTG 372
C C + + CRL+ W+ TTG
Sbjct: 696 CSCNGDTTESENCRLLSSWSEWTTTG 721
>Z70754-3|CAA94773.1| 293|Caenorhabditis elegans Hypothetical
protein F58E6.3 protein.
Length = 293
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 418 TTSRGTEPTKTVESSTRARYSSECRPTSSQCIHISYNNYKKLYKKETFKCK*VDVGNFRN 597
T +G K E + + + S+ + CI + N+KK+Y + KCK VGN +
Sbjct: 197 TYQQGANTAKMCEWTNQCKASTHNCHWLAACIDLPDENHKKMY---SCKCKPGFVGNGFH 253
Query: 598 C 600
C
Sbjct: 254 C 254
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 6.3
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 78 DEAKSIPYFWEKFDPENYSIWYAEY 152
D+ + +P WE+ D +NY +Y ++
Sbjct: 327 DDPRELPPGWEQVDDQNYGTFYVDH 351
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 226 KCANRLSHPSACLVKTTIPPSLECGCGAERSSCSRCRLIGRWTTSPTTG 372
KC+ + + + +P + CGC A S + CR R T S + G
Sbjct: 4 KCSTSTNISNRVCSCSPLPSTSSCGCQASSSCANSCRSTCRPTCSSSGG 52
>U53180-3|AAA96284.1| 727|Caenorhabditis elegans Hypothetical
protein D1014.5 protein.
Length = 727
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +1
Query: 421 TSRGTEPTKTVESSTRARYSSECRPTSSQCIHISYNNYKKLYKKETFKCK 570
T + TE T TVE++ R ++Q SYN K KK KCK
Sbjct: 334 TKKVTEETTTVETTERQNVDDTTENQTTQTTSSSYN--AKEEKKSYRKCK 381
>U70851-7|AAB09130.3| 640|Caenorhabditis elegans Hypothetical
protein M02B7.5 protein.
Length = 640
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +1
Query: 274 TIPPSLECGCGAERSSCSRCRLIGRWTTSPTTGRNWILRARRPRNLSRTTSRGTEP 441
TIP L+ CG S + L R+ TS + + I RA R L R+ P
Sbjct: 75 TIPDHLDARCGVSNSQRNELSLTSRYATS-LSAQLRIDRAARSTTLDRSPPSPAPP 129
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 27.5 bits (58), Expect = 8.3
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +3
Query: 339 DWQVDYESYDWKKLDPSSEETKKLVQDYFSWNGTDKDGRKFNQGKIFK*MPT 494
D+ VD ++D D S E + ++ + WN T R+ GK +PT
Sbjct: 340 DYYVDLVTHDNLTSDASRESSVRIARLVNKWNQTAPPVRRTASGKFLLDLPT 391
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,880,190
Number of Sequences: 27780
Number of extensions: 367079
Number of successful extensions: 1479
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1469
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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