Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt22c13
(720 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015802-1|AAH15802.1| 243|Homo sapiens RWD domain containing 1... 145 1e-34
AL121953-5|CAC14427.1| 243|Homo sapiens RWD domain containing 1... 145 1e-34
AF132958-1|AAD27733.1| 241|Homo sapiens CGI-24 protein protein. 139 1e-32
BC107432-1|AAI07433.1| 188|Homo sapiens RWD domain containing 4... 46 1e-04
BC067752-1|AAH67752.1| 188|Homo sapiens RWD domain containing 4... 46 1e-04
BC017472-1|AAH17472.1| 188|Homo sapiens RWD domain containing 4... 46 1e-04
BC015612-1|AAH15612.1| 459|Homo sapiens ring finger protein 25 ... 46 2e-04
AK222525-1|BAD96245.1| 459|Homo sapiens ring finger protein 25 ... 46 2e-04
AK023968-1|BAB14743.1| 439|Homo sapiens protein ( Homo sapiens ... 46 2e-04
BC021102-1|AAH21102.1| 426|Homo sapiens zinc finger CCCH-type c... 36 0.11
AK001901-1|BAA91968.1| 426|Homo sapiens protein ( Homo sapiens ... 36 0.11
AF220184-1|AAF67649.1| 397|Homo sapiens uncharacterized hypotha... 36 0.11
AF109366-1|AAQ13514.1| 413|Homo sapiens MSTP012 protein. 36 0.11
AC018867-1|AAX88885.1| 426|Homo sapiens unknown protein. 36 0.11
BC125142-1|AAI25143.1| 185|Homo sapiens RWDD3 protein protein. 33 1.0
CR533493-1|CAG38524.1| 195|Homo sapiens RWDD3 protein. 32 1.8
BC002366-1|AAH02366.1| 820|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 31 5.5
AF026402-1|AAB87902.1| 820|Homo sapiens U5 snRNP 100 kD protein... 31 5.5
>BC015802-1|AAH15802.1| 243|Homo sapiens RWD domain containing 1
protein.
Length = 243
Score = 145 bits (352), Expect = 1e-34
Identities = 76/162 (46%), Positives = 107/162 (66%)
Frame = +1
Query: 139 DYNYEQTSEVEALDSIYFGDMTVIETKPFHKFSIPIKSEGFDDGEGLACHLVFTYTSKYP 318
DY EQ +E+EAL+SIY TV+ P F+I + SE ++ E + L FTY+ KYP
Sbjct: 3 DYGEEQRNELEALESIYPDSFTVLSENP-PSFTITVTSEAGENDETVQTTLKFTYSEKYP 61
Query: 319 DELPIIEIDNEENFDNIVDKEELLTHLAEQGKENLGMVMVFTLVSAGQEWLNETWDKVKK 498
DE P+ EI ++EN ++ D ++L LA Q +ENLGMVM+FTLV+A QE LNE D++K
Sbjct: 62 DEAPLYEIFSQENLEDN-DVSDILKLLALQAEENLGMVMIFTLVTAVQEKLNEIVDQIKT 120
Query: 499 EREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDM 624
REE K+K EEAE + F GT VT+E+FL W+ +F+ ++
Sbjct: 121 RREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAEL 162
>AL121953-5|CAC14427.1| 243|Homo sapiens RWD domain containing 1
protein.
Length = 243
Score = 145 bits (352), Expect = 1e-34
Identities = 76/162 (46%), Positives = 107/162 (66%)
Frame = +1
Query: 139 DYNYEQTSEVEALDSIYFGDMTVIETKPFHKFSIPIKSEGFDDGEGLACHLVFTYTSKYP 318
DY EQ +E+EAL+SIY TV+ P F+I + SE ++ E + L FTY+ KYP
Sbjct: 3 DYGEEQRNELEALESIYPDSFTVLSENP-PSFTITVTSEAGENDETVQTTLKFTYSEKYP 61
Query: 319 DELPIIEIDNEENFDNIVDKEELLTHLAEQGKENLGMVMVFTLVSAGQEWLNETWDKVKK 498
DE P+ EI ++EN ++ D ++L LA Q +ENLGMVM+FTLV+A QE LNE D++K
Sbjct: 62 DEAPLYEIFSQENLEDN-DVSDILKLLALQAEENLGMVMIFTLVTAVQEKLNEIVDQIKT 120
Query: 499 EREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDM 624
REE K+K EEAE + F GT VT+E+FL W+ +F+ ++
Sbjct: 121 RREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAEL 162
>AF132958-1|AAD27733.1| 241|Homo sapiens CGI-24 protein protein.
Length = 241
Score = 139 bits (336), Expect = 1e-32
Identities = 76/162 (46%), Positives = 107/162 (66%)
Frame = +1
Query: 139 DYNYEQTSEVEALDSIYFGDMTVIETKPFHKFSIPIKSEGFDDGEGLACHLVFTYTSKYP 318
DY EQ +E+EAL+SIY TV+ P F+I + SE ++ E + L FTY+ KYP
Sbjct: 3 DYGEEQRNELEALESIYPDSFTVLSENP-PSFTITVTSEAGENDETVQTTLKFTYSEKYP 61
Query: 319 DELPIIEIDNEENFDNIVDKEELLTHLAEQGKENLGMVMVFTLVSAGQEWLNETWDKVKK 498
DE P+ EI ++EN ++ D ++L LA Q +ENLGMVM+FTLV+A QE LNE D++K
Sbjct: 62 DEAPLYEIFSQENLEDN-DVSDILKLLALQAEENLGMVMIFTLVTAVQEKLNEIVDQIK- 119
Query: 499 EREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDM 624
EER K+K EEAE + F GT VT+E+FL W+ +F+ ++
Sbjct: 120 -LEERRKNKRKEAEEAEKQLFHGTPVTIENFLNWKAKFDAEL 160
>BC107432-1|AAI07433.1| 188|Homo sapiens RWD domain containing 4A
protein.
Length = 188
Score = 46.0 bits (104), Expect = 1e-04
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = +1
Query: 136 MDYNYEQTSEVEALDSIYFGDMTVIETKPFHKFSIPIKSEGFDDGEGLACHLVFTYTSKY 315
M N +Q E+EAL SIY GD + E P F I ++G+ A + ++T Y
Sbjct: 1 MSANEDQEMELEALRSIYEGDESFRELSPV-SFQYRIG----ENGDPKAFLIEISWTETY 55
Query: 316 PDELPIIEIDNEENFDNIVD---KEELLTHLAEQGKENLGMVMVFTL 447
P PI+ ++ F+N + K+ +L L E + NLG M +TL
Sbjct: 56 PQTPPILSMN--AFFNNTISSAVKQSILAKLQEAVEANLGTAMTYTL 100
>BC067752-1|AAH67752.1| 188|Homo sapiens RWD domain containing 4A
protein.
Length = 188
Score = 46.0 bits (104), Expect = 1e-04
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = +1
Query: 136 MDYNYEQTSEVEALDSIYFGDMTVIETKPFHKFSIPIKSEGFDDGEGLACHLVFTYTSKY 315
M N +Q E+EAL SIY GD + E P F I ++G+ A + ++T Y
Sbjct: 1 MSANEDQEMELEALRSIYEGDESFRELSPV-SFQYRIG----ENGDPKAFLIEISWTETY 55
Query: 316 PDELPIIEIDNEENFDNIVD---KEELLTHLAEQGKENLGMVMVFTL 447
P PI+ ++ F+N + K+ +L L E + NLG M +TL
Sbjct: 56 PQTPPILSMN--AFFNNTISSAVKQSILAKLQEAVEANLGTAMTYTL 100
>BC017472-1|AAH17472.1| 188|Homo sapiens RWD domain containing 4A
protein.
Length = 188
Score = 46.0 bits (104), Expect = 1e-04
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Frame = +1
Query: 136 MDYNYEQTSEVEALDSIYFGDMTVIETKPFHKFSIPIKSEGFDDGEGLACHLVFTYTSKY 315
M N +Q E+EAL SIY GD + E P F I ++G+ A + ++T Y
Sbjct: 1 MSANEDQEMELEALRSIYEGDESFRELSPV-SFQYRIG----ENGDPKAFLIEISWTETY 55
Query: 316 PDELPIIEIDNEENFDNIVD---KEELLTHLAEQGKENLGMVMVFTL 447
P PI+ ++ F+N + K+ +L L E + NLG M +TL
Sbjct: 56 PQTPPILSMN--AFFNNTISSAVKQSILAKLQEAVEANLGTAMTYTL 100
>BC015612-1|AAH15612.1| 459|Homo sapiens ring finger protein 25
protein.
Length = 459
Score = 45.6 bits (103), Expect = 2e-04
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Frame = +1
Query: 160 SEVEALDSIYFGDMTVIE----TKPFHKFSIPIKSEGFDDGEGLACH-LVFTYTSKYPDE 324
SEVE L+SIY ++ VI+ T P+ + + D C LV ++YP E
Sbjct: 18 SEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHE 77
Query: 325 LPIIEIDNEENFDNIVDKEELLTHLAEQGKENLGMVMVFTLVSAGQEWLNE 477
+P I I N + +L L K LG M++ L+ G+E L +
Sbjct: 78 VPQISIRNPRGLSD-EQIHTILQVLGHVAKAGLGTAMLYELIEKGKEILTD 127
>AK222525-1|BAD96245.1| 459|Homo sapiens ring finger protein 25
variant protein.
Length = 459
Score = 45.6 bits (103), Expect = 2e-04
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Frame = +1
Query: 160 SEVEALDSIYFGDMTVIE----TKPFHKFSIPIKSEGFDDGEGLACH-LVFTYTSKYPDE 324
SEVE L+SIY ++ VI+ T P+ + + D C LV ++YP E
Sbjct: 18 SEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHE 77
Query: 325 LPIIEIDNEENFDNIVDKEELLTHLAEQGKENLGMVMVFTLVSAGQEWLNE 477
+P I I N + +L L K LG M++ L+ G+E L +
Sbjct: 78 VPQISIRNPRGLSD-EQIHTILQVLGHVAKAGLGTAMLYELIEKGKEILTD 127
>AK023968-1|BAB14743.1| 439|Homo sapiens protein ( Homo sapiens
cDNA FLJ13906 fis, clone Y79AA1000013, moderately
similar to Mus musculus RING finger protein AO7 mRNA. ).
Length = 439
Score = 45.6 bits (103), Expect = 2e-04
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Frame = +1
Query: 160 SEVEALDSIYFGDMTVIE----TKPFHKFSIPIKSEGFDDGEGLACH-LVFTYTSKYPDE 324
SEVE L+SIY ++ VI+ T P+ + + D C LV ++YP E
Sbjct: 18 SEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHE 77
Query: 325 LPIIEIDNEENFDNIVDKEELLTHLAEQGKENLGMVMVFTLVSAGQEWLNE 477
+P I I N + +L L K LG M++ L+ G+E L +
Sbjct: 78 VPQISIRNPRGLSD-EQIHTILQVLGHVAKAGLGTAMLYELIEKGKEILTD 127
>BC021102-1|AAH21102.1| 426|Homo sapiens zinc finger CCCH-type
containing 15 protein.
Length = 426
Score = 36.3 bits (80), Expect = 0.11
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 484 DKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQ 609
DK K+E+E+ I + + E T++T+ESFLAW+K+
Sbjct: 220 DKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKR 261
>AK001901-1|BAA91968.1| 426|Homo sapiens protein ( Homo sapiens
cDNA FLJ11039 fis, clone PLACE1004376. ).
Length = 426
Score = 36.3 bits (80), Expect = 0.11
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 484 DKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQ 609
DK K+E+E+ I + + E T++T+ESFLAW+K+
Sbjct: 220 DKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKR 261
>AF220184-1|AAF67649.1| 397|Homo sapiens uncharacterized
hypothalamus protein HT010 protein.
Length = 397
Score = 36.3 bits (80), Expect = 0.11
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 484 DKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQ 609
DK K+E+E+ I + + E T++T+ESFLAW+K+
Sbjct: 220 DKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKR 261
>AF109366-1|AAQ13514.1| 413|Homo sapiens MSTP012 protein.
Length = 413
Score = 36.3 bits (80), Expect = 0.11
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 484 DKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQ 609
DK K+E+E+ I + + E T++T+ESFLAW+K+
Sbjct: 220 DKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKR 261
>AC018867-1|AAX88885.1| 426|Homo sapiens unknown protein.
Length = 426
Score = 36.3 bits (80), Expect = 0.11
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = +1
Query: 484 DKVKKEREERILAKQKADEEAELKRFEGTRVTVESFLAWRKQ 609
DK K+E+E+ I + + E T++T+ESFLAW+K+
Sbjct: 220 DKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKR 261
>BC125142-1|AAI25143.1| 185|Homo sapiens RWDD3 protein protein.
Length = 185
Score = 33.1 bits (72), Expect = 1.0
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 232 FSIPIKSEGFDDGEGLACHLVFTYTSKYPDELPIIEIDNEE--NFDNIVDKEELLTHLAE 405
F I K+EGF D + + LVF YP LP I I++E+ + KE+LL E
Sbjct: 20 FRIHTKAEGFMDAD-IPLELVFHLPVNYPSCLPGISINSEQLTRAQCVTVKEKLL----E 74
Query: 406 QGKENLGMVMVFTLV 450
Q + L MV LV
Sbjct: 75 QAESLLSEPMVHELV 89
>CR533493-1|CAG38524.1| 195|Homo sapiens RWDD3 protein.
Length = 195
Score = 32.3 bits (70), Expect = 1.8
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +1
Query: 232 FSIPIKSEGFDDGEGLACHLVFTYTSKYPDELPIIEIDNEE--NFDNIVDKEELLTHLAE 405
F I K+EGF D + + LVF YP LP I I++E+ + KE+LL E
Sbjct: 35 FRIHTKAEGFMDAD-IPLELVFHLPVNYPSCLPGISINSEQLTRARCVTVKEKLL----E 89
Query: 406 QGKENLGMVMVFTLV 450
Q + L MV LV
Sbjct: 90 QAESLLSEPMVHELV 104
>BC002366-1|AAH02366.1| 820|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23 protein.
Length = 820
Score = 30.7 bits (66), Expect = 5.5
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 508 ERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGNPS*EGTRSKR*EQTDWKR 684
E +LAK+KA+EEAE K ++ E+ R+Q E++ E R KR + D R
Sbjct: 145 EELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGR 203
>AF026402-1|AAB87902.1| 820|Homo sapiens U5 snRNP 100 kD protein
protein.
Length = 820
Score = 30.7 bits (66), Expect = 5.5
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +1
Query: 508 ERILAKQKADEEAELKRFEGTRVTVESFLAWRKQFEIDMGNPS*EGTRSKR*EQTDWKR 684
E +LAK+KA+EEAE K ++ E+ R+Q E++ E R KR + D R
Sbjct: 145 EELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGR 203
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,302,379
Number of Sequences: 237096
Number of extensions: 2056568
Number of successful extensions: 4507
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4492
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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