Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt22c07
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF151833-1|AAD34070.1| 346|Homo sapiens CGI-75 protein protein. 95 3e-19
BC017788-1|AAH17788.1| 346|Homo sapiens transcription factor B1... 94 3e-19
BC005183-1|AAH05183.1| 341|Homo sapiens Unknown (protein for IM... 94 3e-19
AL139101-2|CAI20506.1| 346|Homo sapiens transcription factor B1... 94 3e-19
BC002698-1|AAH02698.1| 106|Homo sapiens coiled-coil domain cont... 42 0.002
U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein. 30 8.2
BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis end... 30 8.2
AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associat... 30 8.2
AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis end... 30 8.2
>AF151833-1|AAD34070.1| 346|Homo sapiens CGI-75 protein protein.
Length = 346
Score = 94.7 bits (225), Expect = 3e-19
Identities = 45/74 (60%), Positives = 57/74 (77%)
Frame = +2
Query: 425 MAVAKTALQIRLPPLPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVC 604
MA + RLPPLP+I+++IKL +L+A ELSQNFL++ RL DKIVR +GN+ N V
Sbjct: 1 MAASGKLSTCRLPPLPTIREIIKLLRLQAANELSQNFLLDLRLTDKIVRKAGNLTNAYVY 60
Query: 605 EVGPGPGGITRSII 646
EVGPGPGGITRSI+
Sbjct: 61 EVGPGPGGITRSIL 74
>BC017788-1|AAH17788.1| 346|Homo sapiens transcription factor B1,
mitochondrial protein.
Length = 346
Score = 94.3 bits (224), Expect = 3e-19
Identities = 44/74 (59%), Positives = 58/74 (78%)
Frame = +2
Query: 425 MAVAKTALQIRLPPLPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVC 604
MA + RLPPLP+I+++IKL +L+A ++LSQNFL++ RL DKIVR +GN+ N V
Sbjct: 1 MAASGKLSTCRLPPLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVY 60
Query: 605 EVGPGPGGITRSII 646
EVGPGPGGITRSI+
Sbjct: 61 EVGPGPGGITRSIL 74
>BC005183-1|AAH05183.1| 341|Homo sapiens Unknown (protein for
IMAGE:4041141) protein.
Length = 341
Score = 94.3 bits (224), Expect = 3e-19
Identities = 44/74 (59%), Positives = 58/74 (78%)
Frame = +2
Query: 425 MAVAKTALQIRLPPLPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVC 604
MA + RLPPLP+I+++IKL +L+A ++LSQNFL++ RL DKIVR +GN+ N V
Sbjct: 1 MAASGKLSTCRLPPLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVY 60
Query: 605 EVGPGPGGITRSII 646
EVGPGPGGITRSI+
Sbjct: 61 EVGPGPGGITRSIL 74
>AL139101-2|CAI20506.1| 346|Homo sapiens transcription factor B1,
mitochondrial protein.
Length = 346
Score = 94.3 bits (224), Expect = 3e-19
Identities = 44/74 (59%), Positives = 58/74 (78%)
Frame = +2
Query: 425 MAVAKTALQIRLPPLPSIKDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQNHTVC 604
MA + RLPPLP+I+++IKL +L+A ++LSQNFL++ RL DKIVR +GN+ N V
Sbjct: 1 MAASGKLSTCRLPPLPTIREIIKLLRLQAAKQLSQNFLLDLRLTDKIVRKAGNLTNAYVY 60
Query: 605 EVGPGPGGITRSII 646
EVGPGPGGITRSI+
Sbjct: 61 EVGPGPGGITRSIL 74
>BC002698-1|AAH02698.1| 106|Homo sapiens coiled-coil domain
containing 56 protein.
Length = 106
Score = 41.5 bits (93), Expect = 0.002
Identities = 27/86 (31%), Positives = 46/86 (53%)
Frame = +3
Query: 153 SVMGDSAYKPKISGTQQDPVLKQAEIAYMKLIEERNRERVQKLQVISKRNRLTGFTIGAG 332
S G++ + +I T++ L ++ M+ E ++V L RN +TG IGA
Sbjct: 12 SKRGEAPFAQRIDPTREK--LTPEQLHSMRQAELAQWQKV--LPRRRTRNIVTGLGIGAL 67
Query: 333 VLGVYLYSIFAIKQETFLDDFDEPPK 410
VL +Y Y+ ++I QE FLD+ ++ K
Sbjct: 68 VLAIYGYTFYSISQERFLDELEDEAK 93
>U94836-1|AAB53327.1| 884|Homo sapiens ERPROT 213-21 protein.
Length = 884
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 203 RSSAQAGRNSLYEINR-REKSRTRSKITSDFETQSTDGLHDRSRSVGC 343
R Q RNS +R R KSR RS S+ + + G + RSRS C
Sbjct: 693 RRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSC 740
>BC021294-1|AAH21294.1| 884|Homo sapiens calcium homeostasis
endoplasmic reticulum protein protein.
Length = 884
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 203 RSSAQAGRNSLYEINR-REKSRTRSKITSDFETQSTDGLHDRSRSVGC 343
R Q RNS +R R KSR RS S+ + + G + RSRS C
Sbjct: 693 RRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSC 740
>AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associated
factor 6 protein.
Length = 916
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 203 RSSAQAGRNSLYEINR-REKSRTRSKITSDFETQSTDGLHDRSRSVGC 343
R Q RNS +R R KSR RS S+ + + G + RSRS C
Sbjct: 725 RRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSC 772
>AB209730-1|BAD92967.1| 399|Homo sapiens calcium homeostasis
endoplasmic reticulum protein variant protein.
Length = 399
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 203 RSSAQAGRNSLYEINR-REKSRTRSKITSDFETQSTDGLHDRSRSVGC 343
R Q RNS +R R KSR RS S+ + + G + RSRS C
Sbjct: 208 RRKGQEKRNSGPSRSRSRSKSRGRSSSRSNSRSSKSSGSYSRSRSRSC 255
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,113,215
Number of Sequences: 237096
Number of extensions: 1635300
Number of successful extensions: 3747
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3747
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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