Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt22b16
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical pr... 35 0.065
Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical pr... 35 0.065
Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical pr... 30 1.4
U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein. 30 1.4
U53155-1|AAC48268.1| 393|Caenorhabditis elegans Oocyte maturati... 30 1.4
AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical... 30 1.4
Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z82267-5|CAB05193.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z82261-4|CAB05147.1| 203|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL110495-2|CAB60410.1| 203|Caenorhabditis elegans Hypothetical ... 29 3.2
AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical ... 29 4.3
Z99288-6|CAB16549.2| 286|Caenorhabditis elegans Hypothetical pr... 28 5.7
U40801-2|AAA81502.2| 324|Caenorhabditis elegans Hypothetical pr... 28 5.7
AF077544-3|AAK39242.3| 458|Caenorhabditis elegans Hypothetical ... 27 9.9
>Z74033-2|CAA98476.2| 419|Caenorhabditis elegans Hypothetical
protein F38B7.1b protein.
Length = 419
Score = 34.7 bits (76), Expect = 0.065
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 270 EHCRQWAQHGSCAYGKSCKFA 332
E CR W HG C YG+ C++A
Sbjct: 161 ELCRSWMDHGRCNYGERCQYA 181
>Z74033-1|CAA98475.2| 460|Caenorhabditis elegans Hypothetical
protein F38B7.1a protein.
Length = 460
Score = 34.7 bits (76), Expect = 0.065
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 270 EHCRQWAQHGSCAYGKSCKFA 332
E CR W HG C YG+ C++A
Sbjct: 202 ELCRSWMDHGRCNYGERCQYA 222
>Z66516-7|CAA91362.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 276 CRQWAQHGSCAYGKSCKFA-STHTLISPSKQRA-AH 377
C + + GSC YG++C+FA + L PS+ R AH
Sbjct: 144 CDAFKRSGSCPYGEACRFAHGENELRMPSQPRGKAH 179
>U81043-1|AAC47486.1| 494|Caenorhabditis elegans MEX-1 protein.
Length = 494
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 276 CRQWAQHGSCAYGKSCKFA-STHTLISPSKQRA-AH 377
C + + GSC YG++C+FA + L PS+ R AH
Sbjct: 144 CDAFKRSGSCPYGEACRFAHGENELRMPSQPRGKAH 179
>U53155-1|AAC48268.1| 393|Caenorhabditis elegans Oocyte maturation
defective protein2 protein.
Length = 393
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 276 CRQWAQHGSCAYGKSCKFASTHTLISPSKQRAAHKDNDQKRL 401
C+ W + +CA+ ++C+FA + PS A + + +L
Sbjct: 111 CQAWLESKTCAFAENCRFAHGEEELRPSLIEARQNNKYRTKL 152
>AL023828-30|CAA19470.2| 494|Caenorhabditis elegans Hypothetical
protein W03C9.7 protein.
Length = 494
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Frame = +3
Query: 276 CRQWAQHGSCAYGKSCKFA-STHTLISPSKQRA-AH 377
C + + GSC YG++C+FA + L PS+ R AH
Sbjct: 144 CDAFKRSGSCPYGEACRFAHGENELRMPSQPRGKAH 179
>Z81581-6|CAB04666.1| 679|Caenorhabditis elegans Hypothetical
protein T02E1.3b protein.
Length = 679
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 276 CRQWAQHGSCAYGKSCKFA 332
C W + GSC+YG +C +A
Sbjct: 75 CDHWRRSGSCSYGDACWYA 93
>Z81581-5|CAB04667.2| 646|Caenorhabditis elegans Hypothetical
protein T02E1.3a protein.
Length = 646
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 276 CRQWAQHGSCAYGKSCKFA 332
C W + GSC+YG +C +A
Sbjct: 42 CDHWRRSGSCSYGDACWYA 60
>Z81521-4|CAB04229.1| 367|Caenorhabditis elegans Hypothetical
protein F32A11.6 protein.
Length = 367
Score = 29.5 bits (63), Expect = 2.4
Identities = 9/42 (21%), Positives = 22/42 (52%)
Frame = +3
Query: 276 CRQWAQHGSCAYGKSCKFASTHTLISPSKQRAAHKDNDQKRL 401
C+ W + +C + ++C+FA + P+K + + + +L
Sbjct: 136 CQAWLESKTCTFAENCRFAHGEEELRPAKLESRQNNKYKTKL 177
>Z82267-5|CAB05193.1| 203|Caenorhabditis elegans Hypothetical
protein F38C2.7 protein.
Length = 203
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 303 CAYGKSCKFA-STHTLISPSKQR 368
CAYG+ CKFA S H L P +R
Sbjct: 103 CAYGEKCKFAHSVHELRFPQTKR 125
>Z82261-4|CAB05147.1| 203|Caenorhabditis elegans Hypothetical
protein C35D6.4 protein.
Length = 203
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 303 CAYGKSCKFA-STHTLISPSKQR 368
CAYG+ CKFA S H L P +R
Sbjct: 103 CAYGEKCKFAHSVHELRFPQTKR 125
>AL110495-2|CAB60410.1| 203|Caenorhabditis elegans Hypothetical
protein Y60A9.3 protein.
Length = 203
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 303 CAYGKSCKFA-STHTLISPSKQR 368
CAYG+ CKFA S H L P +R
Sbjct: 103 CAYGEKCKFAHSVHELRFPQTKR 125
>AF024502-6|AAB70378.4| 402|Caenorhabditis elegans Hypothetical
protein M151.1 protein.
Length = 402
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1
Query: 571 KWIQTKTCEKIKKKSCPVRLHLEALVLRVFRRLHQTA 681
K +QT TCE+ KKK VR + V+++FRR + A
Sbjct: 367 KLVQTLTCEEWKKKGNRVR-NSSKKVVQIFRRSSRLA 402
>Z99288-6|CAB16549.2| 286|Caenorhabditis elegans Hypothetical
protein ZK262.7 protein.
Length = 286
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +2
Query: 56 NLLDFTVPVREDYFLVLFF*F--NVIQMYFYYNVKTRKKK 169
N D R YFL LFF F +I ++YY + K K
Sbjct: 139 NAPDILSTTRNGYFLTLFFIFVNTLISCFYYYGFRVIKYK 178
>U40801-2|AAA81502.2| 324|Caenorhabditis elegans Hypothetical
protein F28E10.4 protein.
Length = 324
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 538 SSCSVN*NYR*KWIQTKTCEKIKKKSCPVRLHLEALVLRVFRRLHQTAAHRHLHL 702
++C+V + R K + TCE++ K C +R VL V R H T L L
Sbjct: 85 TACNVEVSRR-KGVTPVTCERLAKSGCNLRKGHACFVLDVERPPHMTTTSVGLKL 138
>AF077544-3|AAK39242.3| 458|Caenorhabditis elegans Hypothetical
protein H22K11.4a protein.
Length = 458
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -3
Query: 268 VVFLALDDFLVPSRSNTLGLIERSFVFGNSTDIFLFPCFDIIVE 137
V+ LD+F + R + L+E S GN+ +F P + VE
Sbjct: 97 VIAKRLDNFDIQQRMVVINLVEDSLYQGNTQQVFELPINGLDVE 140
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,832,643
Number of Sequences: 27780
Number of extensions: 240153
Number of successful extensions: 718
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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