Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt22b14
(714 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0921 + 21586034-21586229,21586464-21586576,21586768-215868... 97 9e-21
01_06_0628 + 30707353-30707548,30707846-30707958,30708090-307081... 93 3e-19
01_07_0051 - 40759529-40759624,40759728-40759835,40759972-407601... 81 6e-16
03_02_0387 - 8016399-8016575,8016661-8016788,8017073-8017214,801... 80 2e-15
01_07_0052 - 40767252-40767347,40767455-40767562,40767689-407678... 79 3e-15
11_04_0455 + 17903921-17904046,17904149-17904214,17905028-179051... 79 3e-15
01_07_0050 - 40751994-40752086,40752193-40752300,40752501-407526... 73 2e-13
10_02_0148 - 5859664-5859828,5859916-5860043,5860310-5860451,586... 60 2e-09
02_05_1150 + 34481965-34482076,34482174-34482268,34482380-344824... 56 2e-08
10_01_0086 - 1064650-1065379,1065796-1065950,1066029-1066141,106... 32 0.52
06_03_1058 + 27254195-27254382,27255041-27255116,27255254-272554... 32 0.52
02_03_0155 + 15805683-15805743,15805824-15806105,15808293-158089... 29 4.8
01_07_0111 - 41137822-41138973,41139453-41139540,41139850-411399... 29 4.8
05_06_0164 + 26085766-26085799,26086908-26087030,26087406-260875... 28 6.4
05_05_0360 - 24395993-24397540,24397626-24397730,24398731-24399111 28 8.5
04_04_0965 - 29762388-29762564,29764272-29766361,29766567-297671... 28 8.5
>10_08_0921 +
21586034-21586229,21586464-21586576,21586768-21586875,
21586967-21587205,21587301-21587399,21587448-21587535,
21587617-21587750,21588274-21588362,21588718-21588751,
21588830-21588898,21589216-21589339
Length = 430
Score = 97.5 bits (232), Expect = 9e-21
Identities = 73/195 (37%), Positives = 99/195 (50%), Gaps = 37/195 (18%)
Frame = +3
Query: 240 FCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGREDTI 419
F N+Y+GLS+HP + AA + ++YG G ICG + HK +E L++ +ED +
Sbjct: 83 FSGNDYMGLSSHPAIRHAAVKAAEEYGMGPRGSALICGYTTYHKMVEESLAELKKKEDCL 142
Query: 420 LYGSCFDAN------AGLFESMLT-----PED---AVFSDALNHASIIDGIRLCKAQK-- 551
L + F AN G S+L ED A+FSDALNHASIIDGIRL + Q+
Sbjct: 143 LCPTGFSANMAVMTALGNISSLLAAGRKPAEDERIAIFSDALNHASIIDGIRLVERQQEV 202
Query: 552 --YRYPHRDLTELEHLLAHSEARIKLIVTDG-------------------VFSMDGTVAP 668
+ Y H D++ LE LL+ K++VTD +FSMDG AP
Sbjct: 203 VSFVYKHCDMSHLELLLSSCSMEKKVVVTDRQVIHPSKFHHLRSIYSLYYLFSMDGDFAP 262
Query: 669 IKGLXDLADKYRALL 713
+ L L KY LL
Sbjct: 263 LPELVKLRRKYGFLL 277
>01_06_0628 +
30707353-30707548,30707846-30707958,30708090-30708197,
30708305-30708543,30708774-30708861,30708942-30709075,
30709285-30709498,30709671-30709759,30710194-30710262,
30710560-30710683
Length = 457
Score = 92.7 bits (220), Expect = 3e-19
Identities = 68/176 (38%), Positives = 93/176 (52%), Gaps = 18/176 (10%)
Frame = +3
Query: 240 FCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGREDTI 419
F N+Y+GLS+HP + +AA + ++YG G ICG + HK +E L++ +ED +
Sbjct: 83 FSGNDYMGLSSHPAIRKAAVKAAQEYGMGPRGSALICGYTTYHKLVEESLAELKKKEDCL 142
Query: 420 LYGSCFDAN------AGLFESMLT----PED----AVFSDALNHASIIDGIRLCKAQK-- 551
L + F AN G S+L+ P + AVFSDALNHASIIDGIRL + Q+
Sbjct: 143 LCPTGFSANMAVMTALGSVSSILSVGRKPAEGERIAVFSDALNHASIIDGIRLVERQQEV 202
Query: 552 --YRYPHRDLTELEHLLAHSEARIKLIVTDGVFSMDGTVAPIKGLXDLADKYRALL 713
+ Y H D+ L+ LL +FSMDG AP+ L L KY LL
Sbjct: 203 VAFVYKHCDMHHLDFLL--------------LFSMDGDFAPLPELVKLRRKYGFLL 244
>01_07_0051 -
40759529-40759624,40759728-40759835,40759972-40760138,
40760670-40760796,40760885-40761046,40761235-40761398,
40761561-40761654,40761736-40761860,40762304-40762449,
40762796-40762884,40763453-40763518,40763824-40763973
Length = 497
Score = 81.4 bits (192), Expect = 6e-16
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Frame = +3
Query: 234 LNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGRE 410
LN + NYLG + E E LKKY A SVR G +H ELE +++F G+
Sbjct: 111 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKP 170
Query: 411 DTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKYRYPHRDLTELEH 590
IL+G + N+ + +++ + SD+LNH SI++G R A + H + LE
Sbjct: 171 AAILFGMGYVTNSAIIPALIGKGGLIISDSLNHNSIVNGARGSGASVQVFQHNNPAHLEE 230
Query: 591 LL----------AHSEARIKLIVTDGVFSMDGTVAPIKGLXDLADKYRA 707
+L H + +++ +G++SM+G + + + + KY+A
Sbjct: 231 VLREQIAGGQPRTHRRWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKA 279
>03_02_0387 -
8016399-8016575,8016661-8016788,8017073-8017214,
8017301-8017396,8017572-8017712,8017857-8018031,
8018443-8018575,8018661-8018733,8018807-8018900,
8019890-8019981,8020091-8020185,8020267-8020378
Length = 485
Score = 79.8 bits (188), Expect = 2e-15
Identities = 43/166 (25%), Positives = 81/166 (48%), Gaps = 7/166 (4%)
Frame = +3
Query: 228 EFLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGR 407
E +NF + NYLGL + +++++ L+KYG G R GT +H + E ++++F G
Sbjct: 112 EVINFASANYLGLIGNEKIIDSCVGSLEKYGVGSCGPRGFYGTIDVHLDCEAKIAKFLGT 171
Query: 408 EDTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKYRYPHRDLTELE 587
D+ILY + + D + +D H ++ +G+ L ++ + H D+ L
Sbjct: 172 PDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLHLSRSTVVYFKHNDMASLA 231
Query: 588 HLL-------AHSEARIKLIVTDGVFSMDGTVAPIKGLXDLADKYR 704
+ L +E + IV + ++ G +AP+ + L +KYR
Sbjct: 232 NTLEKLTRGNKRAEKIRRYIVVESIYQNSGQIAPLDEIVRLKEKYR 277
>01_07_0052 -
40767252-40767347,40767455-40767562,40767689-40767855,
40767930-40768056,40768138-40768299,40768467-40768630,
40768722-40768815,40768892-40769016,40769110-40769255,
40769361-40769449,40769564-40769608,40770165-40770230,
40770332-40770457
Length = 504
Score = 79.4 bits (187), Expect = 3e-15
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 11/169 (6%)
Frame = +3
Query: 234 LNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGRE 410
LN + NYLG + E E LKKY A SVR G +H ELE +++F G+
Sbjct: 118 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSVRVDGGNTKLHVELEELVARFVGKP 177
Query: 411 DTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKYRYPHRDLTELEH 590
IL+G + N+ + +++ + SD+LNH SI++G R A + H + LE
Sbjct: 178 AAILFGMGYVTNSAIIPALVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNNPAHLEE 237
Query: 591 LL----------AHSEARIKLIVTDGVFSMDGTVAPIKGLXDLADKYRA 707
+L H + +++ +G++SM+G + + + + KY+A
Sbjct: 238 VLREQIAGGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEVIAVCKKYKA 286
>11_04_0455 +
17903921-17904046,17904149-17904214,17905028-17905116,
17905513-17905658,17905743-17905867,17905964-17906057,
17906144-17906307,17906449-17906610,17906683-17906809,
17906854-17906862,17906912-17907078,17907113-17907307,
17907398-17907490
Length = 520
Score = 79.0 bits (186), Expect = 3e-15
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Frame = +3
Query: 234 LNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGRE 410
LN + NYLG + E E LKKY SVR GT +H ELE +++F G+
Sbjct: 103 LNLGSYNYLGFAAADEYCTPLVIESLKKYSPSTCSVRVDGGTTKLHTELEELVARFVGKP 162
Query: 411 DTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKYRYPHRDLTELEH 590
IL+G + N+ + ++ + SD+LNH SI++G R A + H LE
Sbjct: 163 AAILFGMGYVTNSAIIPCLVGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNSPAHLEE 222
Query: 591 LL----------AHSEARIKLIVTDGVFSMDGTVAPIKGLXDLADKYRA 707
+L H + +++ +G++SM+G + + + + KY+A
Sbjct: 223 VLREQIAGGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIIAVCKKYKA 271
>01_07_0050 -
40751994-40752086,40752193-40752300,40752501-40752667,
40752756-40752882,40752984-40753145,40753674-40753837,
40753931-40754024,40754160-40754284,40754387-40754532,
40754676-40754764,40755524-40755589,40755990-40756148
Length = 499
Score = 73.3 bits (172), Expect = 2e-13
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 11/168 (6%)
Frame = +3
Query: 234 LNFCANNYLGLSNHPEV-VEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGRE 410
LN + NYLG + E E LKKY A S R G +H ELE +++F +
Sbjct: 114 LNLASFNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGNTQLHIELEELVARFVRKP 173
Query: 411 DTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKYRYPHRDLTELEH 590
IL + N+ + +++ + SD+LNH SI+ G R A + H + LE
Sbjct: 174 SAILLAMGYATNSAIIPALIGKGGLIISDSLNHNSIVSGARASGATIRVFEHNNPAHLEK 233
Query: 591 LL----------AHSEARIKLIVTDGVFSMDGTVAPIKGLXDLADKYR 704
LL H + L++ +G++SM+G + + + + KY+
Sbjct: 234 LLREQISGGQPRTHRAWKKILVIVEGIYSMEGELCKLPEIISVCKKYK 281
>10_02_0148 -
5859664-5859828,5859916-5860043,5860310-5860451,
5860548-5860643,5860836-5860976,5861799-5861973,
5862416-5862702,5862777-5862870,5863244-5863335,
5863459-5863553,5863648-5863759
Length = 508
Score = 59.7 bits (138), Expect = 2e-09
Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 34/193 (17%)
Frame = +3
Query: 228 EFLNFCANNYLGLSNHPEVVEAAREGLKKYGAG-----------------LSSVRFICGT 356
E +NF + NYLGL + +++++ ++KYG G L S+ +I
Sbjct: 112 EVVNFASANYLGLIGNEKIIDSCVGSVEKYGVGSCGPRSFYGTIGSYLLWLFSIIYILWP 171
Query: 357 QS----------IHKELENRLSQFHGREDTILYGSCFDANAGLFESMLTPEDAVFSDALN 506
Q +H + E++++ F G +D+ILY + + D + +D
Sbjct: 172 QKKNLAILWFADVHLDCESKIANFLGTQDSILYSYGISTIFSVIPAFCKKGDIIVADEGV 231
Query: 507 HASIIDGIRLCKAQKYRYPHRDLTELEHLLA-------HSEARIKLIVTDGVFSMDGTVA 665
H ++ +G++L ++ + H D+ L +L H+E + IV + ++ G +A
Sbjct: 232 HWAVQNGLQLSRSTVVYFKHNDMASLASILEKLTHGNKHTEKIRRYIVVEAIYQNSGQIA 291
Query: 666 PIKGLXDLADKYR 704
P+ + L +KYR
Sbjct: 292 PLDEIVRLKEKYR 304
>02_05_1150 +
34481965-34482076,34482174-34482268,34482380-34482471,
34482878-34482971,34483191-34483354,34483755-34483929,
34484017-34484157,34484357-34484452,34484549-34484690,
34484953-34485080,34485179-34485343
Length = 467
Score = 56.4 bits (130), Expect = 2e-08
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Frame = +3
Query: 228 EFLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGR 407
E +NF + NYLGL + +++ G L+ + F +H + E ++++F G
Sbjct: 112 EVVNFASANYLGLIGNEKIL----------GRNLAILLF----SDVHLDCETKIAKFLGT 157
Query: 408 EDTILYGSCFDANAGLFESMLTPEDAVFSDALNHASIIDGIRLCKAQKYRYPHRDLTELE 587
+D+ILY + + D + +D H ++ +G++L ++ + H D+ L
Sbjct: 158 QDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLQLSRSTVVYFKHNDMASLA 217
Query: 588 HLL---AHSEARI----KLIVTDGVFSMDGTVAPIKGLXDLADKYR 704
L H R + IV + ++ G +AP+ + L +KYR
Sbjct: 218 STLEKLTHGNKRTEKIRRYIVVEAIYQNSGQIAPLDEIVRLKEKYR 263
>10_01_0086 -
1064650-1065379,1065796-1065950,1066029-1066141,
1066238-1066345,1066773-1066890,1066996-1067069,
1067595-1067690,1068062-1068455
Length = 595
Score = 31.9 bits (69), Expect = 0.52
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = -2
Query: 614 SCFAVR*QVLQFGQISVRVSVFLRLA*PDPVYYGRVVQSVREHRVFRRQHGLEQACVGVE 435
+CF V +V+ ++V + L D G+V+ V E + RR+ GLE V V
Sbjct: 176 TCFVVN-EVIDGRMVNVLEGLKLYKGYVDLTEIGKVLSFVNEAKTMRRKPGLEGQTVVVA 234
Query: 434 TRPVK 420
RP+K
Sbjct: 235 KRPMK 239
>06_03_1058 +
27254195-27254382,27255041-27255116,27255254-27255418,
27255580-27255671,27255713-27255754,27256342-27256387,
27258456-27258683
Length = 278
Score = 31.9 bits (69), Expect = 0.52
Identities = 21/78 (26%), Positives = 38/78 (48%)
Frame = +3
Query: 264 LSNHPEVVEAAREGLKKYGAGLSSVRFICGTQSIHKELENRLSQFHGREDTILYGSCFDA 443
L N + +EA+ ++ G LSSV + + +LE+ LS+ H R+D ++ D
Sbjct: 97 LRNEIDQLEASLR--RQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDM 154
Query: 444 NAGLFESMLTPEDAVFSD 497
+ S++ VF+D
Sbjct: 155 RRMVHYSLIVVAVVVFAD 172
>02_03_0155 +
15805683-15805743,15805824-15806105,15808293-15808959,
15809440-15810490
Length = 686
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = -1
Query: 516 WTRGSKRPRTPRLQASAWTRTGLRWRRNKTRKGLCLRGRGTE 391
WT +K +W+ RWRR K R+GL GR TE
Sbjct: 237 WT--TKEREKAAASRGSWSVGRRRWRRGKWRRGLGGVGRRTE 276
>01_07_0111 - 41137822-41138973,41139453-41139540,41139850-41139969,
41140165-41140211,41140796-41141029,41141305-41141505,
41141506-41143407,41144140-41145303,41145574-41145879
Length = 1737
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3
Query: 57 QVRHLHEVKRQERAGVAKLRDVLEDR 134
+VRHL V+R E A A LRD++E R
Sbjct: 956 EVRHLENVERLEDARKANLRDMVELR 981
>05_06_0164 +
26085766-26085799,26086908-26087030,26087406-26087525,
26087632-26087696
Length = 113
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +3
Query: 99 GVAKLRDVLEDRLQEIKRAKTWKHERVLTSPQDTKVR 209
G A +++ +++K+ K WKH + +T Q +K+R
Sbjct: 2 GCAGSTPKVDENSKKLKKPKPWKHTQAITPTQLSKMR 38
>05_05_0360 - 24395993-24397540,24397626-24397730,24398731-24399111
Length = 677
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +3
Query: 108 KLRDVLEDRLQEIKRAKTWKHERVLTSPQDTKV 206
K+RD +E+ + ++ A+ W+ ERV D K+
Sbjct: 340 KMRDEVEEEKKMLQMAEVWREERVQMKLVDAKL 372
>04_04_0965 -
29762388-29762564,29764272-29766361,29766567-29767170,
29768395-29768637,29768704-29770203
Length = 1537
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Frame = +3
Query: 198 TKVRVQGAQGEFLNFCANNYLGLSNHPEVVEAAREGLKKYGAGLSSVRF---ICGTQSIH 368
TKVRV+G Q + A + HP A+R L++ S + +CG
Sbjct: 519 TKVRVKGPQCSSASHAARRHARGMGHPVKKAASRSCLQRPSVSRDSQQMPESVCGPPG-- 576
Query: 369 KELENRLSQFHG 404
K L N S HG
Sbjct: 577 KMLSNASSIIHG 588
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,315,362
Number of Sequences: 37544
Number of extensions: 358943
Number of successful extensions: 1166
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1156
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -