Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22b09
         (745 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0101 - 766382-767487,767599-767756,767900-768615                 35   0.059

>01_01_0101 - 766382-767487,767599-767756,767900-768615
          Length = 659

 Score = 35.1 bits (77), Expect = 0.059
 Identities = 14/63 (22%), Positives = 35/63 (55%)
 Frame = +1

Query: 466 KNNSADIALYDHSIYSCIIPLDNSINRILMNTYIIICSVVIHIYFNVYICNYISVQICMY 645
           K   A+IA+ D   +SC +  D S N ++  TY+++ + ++ + +   +C ++   + ++
Sbjct: 246 KERIANIAIIDFYFWSCFLLGDRSHNNLIY-TYMVVDTALLILKWTAVLCRFVLAPLAVF 304

Query: 646 WFM 654
            F+
Sbjct: 305 IFL 307


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,607,810
Number of Sequences: 37544
Number of extensions: 246723
Number of successful extensions: 369
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 369
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1968901276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)