Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt22b06
(694 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces pomb... 46 4e-06
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 42 1e-04
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 41 1e-04
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 36 0.004
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 35 0.013
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 34 0.022
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 33 0.030
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 31 0.12
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 31 0.21
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 30 0.36
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 29 0.64
SPCC24B10.03 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 27 2.6
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 2.6
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 27 2.6
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 27 3.4
SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces pombe... 25 7.9
SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|c... 25 7.9
>SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 225
Score = 46.4 bits (105), Expect = 4e-06
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +1
Query: 334 YDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYKTLLEPLARGIYML 513
+D++ L Y K LHPD + + ++++ S+ +++AY TL PL R Y+L
Sbjct: 79 FDIDLGALKSSYLRKMKTLHPDVAQGK---DAALAQRDSAELSKAYNTLKAPLTRAEYIL 135
Query: 514 QLRG-KDIPEK-TEVDQEFLMKIM 579
QL+G + E + D EFLM+IM
Sbjct: 136 QLQGINPVSEDISNSDPEFLMEIM 159
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 41.5 bits (93), Expect = 1e-04
Identities = 24/72 (33%), Positives = 39/72 (54%)
Frame = +1
Query: 283 KPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVN 462
K +K +++KI+GVS+ + + ++ K Y+ L HPDK A ++ E E V
Sbjct: 343 KKSKRKDHYKILGVSK--EATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKE-----VG 395
Query: 463 EAYKTLLEPLAR 498
EAY L +P +R
Sbjct: 396 EAYTILSDPESR 407
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 41.1 bits (92), Expect = 1e-04
Identities = 29/94 (30%), Positives = 46/94 (48%)
Frame = +1
Query: 271 NALQKPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYS 450
N+ K N D Y +I+G+++ ++ D+ + YK L HPDK N V +E EK+
Sbjct: 89 NSRLKLNIWDPY-EILGIAKGTSVD--DVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHY 145
Query: 451 SLVNEAYKTLLEPLARGIYMLQLRGKDIPEKTEV 552
+ AY+ L + R Y L D+P+ V
Sbjct: 146 IEITNAYRALTDDKTRENYAL-YGTPDVPQHISV 178
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 36.3 bits (80), Expect = 0.004
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +1
Query: 334 YDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYKTLLEPLARGIY 507
++ + ++ K YK L HPDK + E++E +E++ V EAY L +P +R +Y
Sbjct: 15 FEASAEEIKKSYKRLALLHHPDKAP--IHEKEEAAERFRG-VQEAYDILKDPESREMY 69
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 34.7 bits (76), Expect = 0.013
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 292 KEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNE 465
KE ++++ V T ++ +L K Y+ L HPDK N + +EIS Y L +E
Sbjct: 3 KETKLYEVLNVDVT--ASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADE 58
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 33.9 bits (74), Expect = 0.022
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +1
Query: 301 NYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYKTL 480
+Y+ I+ +S D + + + K Y+ L HPDK NR + + EK+ L EAY+ L
Sbjct: 9 DYYDILNIS--VDADGDTIKKSYRRLAILYHPDK--NR-ENPEAAREKFQKLA-EAYQVL 62
Query: 481 LEPLARGIY 507
+P R Y
Sbjct: 63 SDPKLREKY 71
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 33.5 bits (73), Expect = 0.030
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +1
Query: 292 KEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAY 471
K Y++I+ + +T + ++ K YK L LHPDK N E + +V++A+
Sbjct: 110 KNHQYYEILDLKKT--CTDTEIKKSYKKLALQLHPDK--NHAPSADEAFK----MVSKAF 161
Query: 472 KTLLEPLARGIY 507
+ L +P R Y
Sbjct: 162 QVLSDPNLRAHY 173
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 31.5 bits (68), Expect = 0.12
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 337 DLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYKTLLE 486
+ +E +L K Y+ L HPDK N K+ +EIS Y L + + L +
Sbjct: 16 EASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRRKLYD 65
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 30.7 bits (66), Expect = 0.21
Identities = 13/59 (22%), Positives = 29/59 (49%)
Frame = +1
Query: 394 PDKYANRVKEEQEISEKYSSLVNEAYKTLLEPLARGIYMLQLRGKDIPEKTEVDQEFLM 570
P + N + EISE +S +AY+ L+E + + + D+ K +++ + ++
Sbjct: 1531 PGNFVNSITSLYEISESFSGETKQAYEQLVETMNKSVSPASEILSDLDNKQQLNDQIII 1589
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 29.9 bits (64), Expect = 0.36
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 334 YDLNENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYKTLLEPLARGIYML 513
YD + + K Y+ ++++L + + R K+EQ EKY N + L RG+ L
Sbjct: 82 YDHEDEEADKIYQSVEEHLSKRRKSQREKQEQLQKEKYEK-ENPKVSSQFADLKRGLSTL 140
Query: 514 QLRG-KDIPEKTEVDQE 561
+IPE ++ ++
Sbjct: 141 TDEDWNNIPEPGDLTRK 157
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 29.1 bits (62), Expect = 0.64
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +1
Query: 349 NDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYKTLL 483
ND+ +KY +L K HPDK N + S + NE Y LL
Sbjct: 46 NDIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEEYFRLL 90
>SPCC24B10.03 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 128
Score = 27.1 bits (57), Expect = 2.6
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 382 KYLHPDKYANRVKEEQEISEKYSSLVNEAYKT-LLEPLARGIYMLQLRGKDIPEKTEVDQ 558
++LH D NR E+ EIS L+NE ++ LL + + +GK KT+ ++
Sbjct: 37 RWLHLDARMNRNIEDLEISNYNLRLMNEQLESQLLSLNVKPVVSFAEQGKSSESKTD-EE 95
Query: 559 EFLM 570
F++
Sbjct: 96 GFIL 99
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 27.1 bits (57), Expect = 2.6
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 313 IMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRVKE 423
+MG+ T D N L + D QK++H Y +R+++
Sbjct: 453 LMGIIHTSDRNLALLVGRSLDAQKFIHDVTYDHRLRD 489
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 27.1 bits (57), Expect = 2.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 136 LKMNFLRILSNNSTKLYITHQFRFIC 213
LK++ I SNN + +++ FRF+C
Sbjct: 1936 LKVDQKEIFSNNQKRAILSYLFRFVC 1961
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 26.6 bits (56), Expect = 3.4
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 223 GKDPKTLVVNLFCSNCNALQKPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDK 402
G D ++ ++ A +K +D Y K + ETY+ + N L ++ ++L +
Sbjct: 35 GNDYESSMIQSQIQEIEAFRK-TVDDMYEKQKSIRETYEKDINKLKRELEELGVEANTAS 93
Query: 403 YANR 414
Y NR
Sbjct: 94 YRNR 97
>SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 377
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 391 HPDKYANRVKEEQEISEKYSSLVNEAYKTLLEP 489
+PD Y N +K++Q+ S ++SL + EP
Sbjct: 30 NPDAYINGIKKDQQSSSWWNSLWSRNTDVASEP 62
>SPBC56F2.06 |mug147||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/68 (26%), Positives = 27/68 (39%)
Frame = +1
Query: 361 KKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYKTLLEPLARGIYMLQLRGKDIPE 540
KK+K + H + ++E YS L NE Y+T G YM + E
Sbjct: 52 KKFKGEDVFAHSISKPFDGQNDEEKPSLYSHLTNELYETHDSSDYFGTYMEREESGHDEE 111
Query: 541 KTEVDQEF 564
+ + D F
Sbjct: 112 EADKDASF 119
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,446,649
Number of Sequences: 5004
Number of extensions: 48274
Number of successful extensions: 164
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 321951680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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