Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22b06
         (694 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    25   0.68 
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              25   0.90 
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   6.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   6.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   6.4  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   6.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.4  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 306 VIVFFVWFLKGITVRTKEVHDQGFR 232
           V++FF W +    V T +  +QGFR
Sbjct: 262 VMLFFYWRIYNAAVSTTKAINQGFR 286


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -3

Query: 236 FGSFPQDQQIKRNW-CVMYSFVLLLDKIRRKFILRFSKTVYYERYYNI 96
           +G FP+D+++K  + CV+  F  ++DK   K      K V  E +  I
Sbjct: 59  YGEFPEDEKLKCYFNCVLEKF-NVMDKKNGKIRYNLLKKVIPEAFKEI 105


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +1

Query: 346 ENDLAKKYKDLQKYLHPDKYANRVKEEQEISEKYSSLVNEAYKTL 480
           E +  K  K+ +KY    K  +R + E+E S +   + + + KT+
Sbjct: 46  EQNSYKNEKEYRKYRETSKERSRDRTERERSREPKIISSLSNKTI 90


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +2

Query: 401 NMLIESKKNKKYLKNI 448
           NML+E +KN + L+NI
Sbjct: 272 NMLMELQKNPQKLENI 287


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -2

Query: 276  GITVRTKEVHDQ 241
            GIT+RT EVH++
Sbjct: 1119 GITLRTAEVHNR 1130


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 207 KTKLVCYVQFCTVVRQNSKEIH 142
           K  L+   Q CT +  N KE+H
Sbjct: 111 KNVLLWDFQECTFISVNGKEVH 132


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = -3

Query: 137 RFSKTVYYERYYNIRDGHEIQ 75
           + +++V Y+ Y N  + HE++
Sbjct: 680 KLARSVLYKIYLNTMESHEVR 700


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,262
Number of Sequences: 438
Number of extensions: 3328
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)