Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt22b02
         (690 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens ...    30   6.8  
BC030525-1|AAH30525.1|   55|Homo sapiens Unknown (protein for MG...    30   8.9  

>AK127997-1|BAC87222.1|  148|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46115 fis, clone TESTI2037085. ).
          Length = 148

 Score = 30.3 bits (65), Expect = 6.8
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +3

Query: 591 RKKYGRRKTRSQKN*RPRKKRSLKKMTKRTKRK 689
           +KK  ++K + +KN + +KK+  KK  K+ K+K
Sbjct: 53  KKKKKKKKKKKKKNKKKKKKKKKKKKKKKRKKK 85



 Score = 29.9 bits (64), Expect = 8.9
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +3

Query: 591 RKKYGRRKTRSQKN*RPRKKRSLKKMTKRTKRK 689
           +KK  ++K + +K  + +KKR  KK  K+ +RK
Sbjct: 62  KKKKNKKKKKKKKKKKKKKKRKKKKKKKKKRRK 94


>BC030525-1|AAH30525.1|   55|Homo sapiens Unknown (protein for
           MGC:40524) protein.
          Length = 55

 Score = 29.9 bits (64), Expect = 8.9
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 585 TSRKKYGRRKTRSQKN*RPRKKRSLKKMTKRTKRK 689
           + R++ GR K + +K  + +KK+  KK  K+ K+K
Sbjct: 5   SQRRRRGRGKKKKRKRKKKKKKKKKKKKKKKKKKK 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,059,557
Number of Sequences: 237096
Number of extensions: 541795
Number of successful extensions: 1728
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)