Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt22a04
(730 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyce... 149 3e-37
SPAC1142.07c |vps32|snf7|vacuolar sorting protein Vps32|Schizosa... 56 4e-09
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 34 0.018
SPBC215.14c |vps20||vacuolar sorting protein Vps20|Schizosacchar... 33 0.055
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 33 0.055
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 33 0.055
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 29 0.68
SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomy... 29 0.68
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 28 1.6
SPAC607.05 |rpn9||19S proteasome regulatory subunit Rpn9|Schizos... 28 1.6
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 27 2.1
SPAC10F6.02c |prp22||ATP-dependent RNA helicase Prp22|Schizosacc... 27 2.1
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch... 27 2.7
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 27 3.6
SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase s... 27 3.6
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 26 4.8
SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29 |Schizosa... 26 4.8
SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyc... 26 6.3
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 26 6.3
SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces ... 25 8.4
>SPCC162.06c |||vacuolar sorting protein Vps60|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 210
Score = 149 bits (362), Expect = 3e-37
Identities = 66/151 (43%), Positives = 105/151 (69%)
Frame = +3
Query: 84 MNRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNS 263
M+RLFGR P +P S+TD I ++D R+D++E K+ KLD +L ++ +++ R GP + +
Sbjct: 1 MHRLFGRKPPTQPTASLTDAIDSLDKRSDSVEVKIAKLDAQLSVFQQKIANTRPGPGQTA 60
Query: 264 VKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEF 443
+KQ+AM VL+QKK+YE QL L+ QSFNMEQA T++LK+T T+ M++ Q+K +
Sbjct: 61 LKQRAMNVLRQKKIYESQLQQLQQQSFNMEQAAMTTESLKNTMATVQTMQETARQLKSQS 120
Query: 444 KKINIDSIDDVNDELADMMEQADEVQEALGR 536
K ++I+ I+ + DE+ D M+ A E+ E LG+
Sbjct: 121 KNVSIEKIEKLQDEIQDYMDAAGELNEVLGQ 151
>SPAC1142.07c |vps32|snf7|vacuolar sorting protein
Vps32|Schizosaccharomyces pombe|chr 1|||Manual
Length = 222
Score = 56.4 bits (130), Expect = 4e-09
Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 225 QMSKMREGPAKNSVKQK--AMRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDTHTT 398
Q+++ E KN+ K A+ LK+KKM+E +L + N+EQ ++ Q T
Sbjct: 41 QIAEQTEIARKNATTNKRLALTALKRKKMHENELVKIEGSRNNIEQQLFSIQNANLNFET 100
Query: 399 ISAMKDGVTQMKKEFKKINIDSIDDVNDELADMMEQADEVQEALGRQYGM 548
+ AM+ G MK + ++ D +D + D++ D ++E+ + G+
Sbjct: 101 LQAMRQGAEAMKSIQRGMDADKVDQIMDKIRDQQTISEEISTMISTPVGL 150
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 34.3 bits (75), Expect = 0.018
Identities = 33/147 (22%), Positives = 74/147 (50%), Gaps = 19/147 (12%)
Frame = +3
Query: 168 DNIEQKVQKLDTELR---KYKDQMSKMREGPAKNSVKQ--KAMRVLKQKKMYE------- 311
DN+E+K+++L E+R + KD+ SK R A+ +Q + R +++K E
Sbjct: 417 DNLERKLRQLRVEIRALEREKDEASKERLKAARKEAEQVEEETRPIREKYELEKSRGSEL 476
Query: 312 ----QQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDV- 476
++LD L+A++ + E+ N T + I ++ + ++++ +K + ++I +
Sbjct: 477 QDAKRRLDELKAKAEDAERRNDFTLAADLKYYGIPDLQKRIEYLEQQKRKADAEAIANAQ 536
Query: 477 --NDELADMMEQADEVQEALGRQYGMP 551
++ L + D++ E + R G+P
Sbjct: 537 PGSEPLLIDVVGPDQINEIVARWTGIP 563
>SPBC215.14c |vps20||vacuolar sorting protein
Vps20|Schizosaccharomyces pombe|chr 2|||Manual
Length = 226
Score = 32.7 bits (71), Expect = 0.055
Identities = 19/92 (20%), Positives = 43/92 (46%)
Frame = +3
Query: 255 KNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMK 434
++S K+ A+R LK KK+Y + Q N+EQ + + +++G ++
Sbjct: 48 RDSDKRGALRALKAKKLYSGLITQTYGQLGNIEQLLSTIEFTLIQKDVMFGLQEGTNLIR 107
Query: 435 KEFKKINIDSIDDVNDELADMMEQADEVQEAL 530
+ + ++ + + ++ + M DEV + L
Sbjct: 108 QLQADMPLERVGRICNDRDEAMSYVDEVNDML 139
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 32.7 bits (71), Expect = 0.055
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 21/176 (11%)
Frame = +3
Query: 66 KRFKPNMNRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMRE 245
K K N L + +PG S+T +K DN+ ++V L + DQ++K +
Sbjct: 227 KDLKDRKNALAKEFEESQPGSSLT--LKEQANVIDNLRKEVFGLKLKCYFLYDQLNKFHD 284
Query: 246 GPAKNSVKQ----KAMRVLKQKKM--YEQQLDNLRA-----QSFNMEQANYATQ---TLK 383
++ +KQ K + + Q+ + YE+++ L + QSFN+ + A TL+
Sbjct: 285 QEVQDIMKQNIDLKTLTMELQRAVAGYEKKISGLESRIKPDQSFNLSTPSPAPSNLITLQ 344
Query: 384 DTH----TTISAMKDGVTQMKKEFKKINIDSIDDVNDE---LADMMEQADEVQEAL 530
+ + + K ++KE K S+ N++ L++M++ +EAL
Sbjct: 345 SRYSQALSELETTKRAFAALRKEKSKKTNYSVGAYNEDRNVLSNMLDNERREKEAL 400
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 32.7 bits (71), Expect = 0.055
Identities = 29/144 (20%), Positives = 64/144 (44%), Gaps = 3/144 (2%)
Frame = +3
Query: 105 AKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMR 284
AK + +TD I +A +EQK + + +RK + ++ + + SV +
Sbjct: 386 AKLRSTNAQLTDRITQESKKASFLEQKASEQEEVIRKLEKDLADV---DVEGSV-YLSNT 441
Query: 285 VLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDS 464
+++ Q N N + + + T SA+ D + Q + F++ N+
Sbjct: 442 TYRREGTSGQLSPTSSIMGGNPSLFNGSVLSRNSVNETGSAIVDVIKQQRDRFRRANVTL 501
Query: 465 IDDV---NDELADMMEQADEVQEA 527
++ V ND++A + + +EV+++
Sbjct: 502 VNQVSAANDKIALLESKLEEVEKS 525
Score = 29.5 bits (63), Expect = 0.51
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +3
Query: 168 DNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYE 311
+ +E++V+ L EL KYKD + E A + ++ L+Q+K+Y+
Sbjct: 141 EKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLYK 188
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 29.1 bits (62), Expect = 0.68
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 72 FKPNMNRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMREGP 251
F+ + +R ++ K P P T + + ADN + K +D + + D + M E P
Sbjct: 1459 FETSSHRPERSSEKKSPSPVFTSVKQTAENDADNEDDKTD-MDDQTEETLDADNTMEEEP 1517
Query: 252 AKNSV 266
+K+ +
Sbjct: 1518 SKDDL 1522
>SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 756
Score = 29.1 bits (62), Expect = 0.68
Identities = 18/95 (18%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +3
Query: 165 ADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSF 344
++ +++ V+KLD + Y+D +K+ G + + + +L++ + +N ++
Sbjct: 46 SERLQESVKKLDANKKTYED--AKLSMGEKMDDLNSSIVSLLQELSTLQSVAENTQSSIV 103
Query: 345 NM----EQANYATQTLKDTHTTISAMKDGVTQMKK 437
M + ++A Q L + T + ++ VT +K
Sbjct: 104 QMTSEIKNLDFAKQNLATSMTMLKRLQMLVTAYEK 138
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 27.9 bits (59), Expect = 1.6
Identities = 23/85 (27%), Positives = 38/85 (44%)
Frame = +3
Query: 63 SKRFKPNMNRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMR 242
SKR PN+ L + K I+ + R E+++ +++ E RK + ++ K +
Sbjct: 240 SKRKGPNVTALQKMLEEKRAREEEEQRIREEEARIAEEEKRLAEVE-EARKEEARLKK-K 297
Query: 243 EGPAKNSVKQKAMRVLKQKKMYEQQ 317
E K + KA KK EQQ
Sbjct: 298 EKERKKKEEMKAQGKYLSKKQKEQQ 322
>SPAC607.05 |rpn9||19S proteasome regulatory subunit
Rpn9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 381
Score = 27.9 bits (59), Expect = 1.6
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +3
Query: 51 FTEFSKRFKPNMNRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKD 224
+T F F+PN+N+L K G + N D N+ Q V +LD E KYKD
Sbjct: 64 YTNFVNSFRPNINQL----KAVYMGLKAFESCSN-DEALRNLNQIVNELDEE--KYKD 114
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 27.5 bits (58), Expect = 2.1
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Frame = +3
Query: 174 IEQKVQKLDTELRKYKDQMSKM--REGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFN 347
IE + + E+++ ++S++ PA VK + + ++ Q L +
Sbjct: 441 IEARQSEKLNEVQEETQRLSQLLISSQPALTEVKHLKLCLSDSQEELLQLNAKLEKANIV 500
Query: 348 MEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSID-DVNDEL 488
+++ N A L S+MKD +T+M + K+ I+S + +VN E+
Sbjct: 501 IDELNSAKLKLSKQVEEESSMKDDLTEMNQRLKE-QIESYENEVNSEI 547
>SPAC10F6.02c |prp22||ATP-dependent RNA helicase
Prp22|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1168
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +3
Query: 57 EFSKRFKPNMNRLFGRAKPKE--PGPSITDCIKNVDGRADNIEQK 185
EF+ F N++RL KPK+ P ++ + +V+G + +++ K
Sbjct: 58 EFTDSFLQNISRLIKEIKPKDDIPTDNVNNGSNSVNGASHDLDSK 102
>SPCC126.07c |||human CTD-binding SR-like protein rA9
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 571
Score = 27.1 bits (57), Expect = 2.7
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +2
Query: 383 GHSYHNICNEGWC 421
GH +HN C E WC
Sbjct: 57 GHYFHNHCLESWC 69
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 114 KEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSK 236
KE + D ++++ G DN+ ++ TEL+K D + K
Sbjct: 930 KEKHQQLLDLLESLVGNNDNLIDSIKTPHTELQKITDHVLK 970
>SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase
subunit Dps1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 26.6 bits (56), Expect = 3.6
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 168 DNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKK 302
D IEQ + ++K KD + + + PA+ ++ A +V+ +KK
Sbjct: 334 DAIEQTITWAKEYIKKAKDSLLCLPDSPARKALFALADKVITRKK 378
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 26.2 bits (55), Expect = 4.8
Identities = 35/147 (23%), Positives = 60/147 (40%), Gaps = 2/147 (1%)
Frame = +3
Query: 69 RFKPNM-NRLFGRAKPKEPGPSITDCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKMRE 245
+ K NM N R + +E G D IKN E+ QKL ++K ++
Sbjct: 183 KVKQNMRNGASARDQAREQGSKAKDKIKNDPDAQKAKEETKQKLQDLYEEFKSVAVDLQG 242
Query: 246 GPA-KNSVKQKAMRVLKQKKMYEQQLDNLRAQSFNMEQANYATQTLKDTHTTISAMKDGV 422
P ++ V+ + K +Q N+ A + E + A Q LK I + +
Sbjct: 243 DPKYQHPVRSLLNLIDKFIDKLSEQSGNVTADT--NEHYDRAMQYLKQLVENI--LNRSL 298
Query: 423 TQMKKEFKKINIDSIDDVNDELADMME 503
+ K++ D+ +D +EL D +E
Sbjct: 299 DNLIDTLKQVQHDAEND--EELKDWLE 323
>SPBC1921.07c ||SPBC21D10.13|SAGA complex subunit Sgf29
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 244
Score = 26.2 bits (55), Expect = 4.8
Identities = 9/34 (26%), Positives = 21/34 (61%)
Frame = +3
Query: 138 DCIKNVDGRADNIEQKVQKLDTELRKYKDQMSKM 239
+C K VDG + IE++++ D ++ ++Q ++
Sbjct: 34 ECYKTVDGDDNPIEERIKACDAGIQTSEEQKKEL 67
>SPAC16E8.06c |nop12||RNA-binding protein Nop12|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 438
Score = 25.8 bits (54), Expect = 6.3
Identities = 15/67 (22%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Frame = +3
Query: 327 LRAQSFNMEQANYATQTLKDTHTTISAMKDGVTQMKKEFKKINIDSIDDVNDE-LADMME 503
L + +E+AN + + + +++ + KK+ KK+N DS DD+ + +++
Sbjct: 50 LTKKDVEVEEANGVEEAAETIESDTKEVQNIKPKSKKKKKKLN-DSSDDIEGKYFEELLA 108
Query: 504 QADEVQE 524
+ DE ++
Sbjct: 109 EEDEEKD 115
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 25.8 bits (54), Expect = 6.3
Identities = 22/104 (21%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Frame = +3
Query: 168 DNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQSFN 347
DN++Q ++ + + K + K+ E N + + M + +++ QL L+
Sbjct: 246 DNLKQLKKETRDNVEETKHLLEKLTE---VNVMCDRHMDAISSEELACHQLTQLKKVVQT 302
Query: 348 ME----QANYATQTLKDTH--TTISAMKDGVTQMKKEFKKINID 461
+E + ++ +KD I+ + VTQ+KK+ ++N+D
Sbjct: 303 LEDIYSEHKKVSEDVKDQRFLEAINGINSIVTQLKKKSTELNVD 346
>SPAC17C9.07 |alg8||glucosyltransferase Alg8|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 25.4 bits (53), Expect = 8.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -2
Query: 507 LVPSYQLTHHLHHQWNQY*SS*ILFSFVLHHPSLQIL 397
L P + H+H Q+N + +L+S VL P +L
Sbjct: 140 LSPGLLIIDHIHFQYNGFLFGLLLWSIVLAKPEKNML 176
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,721,968
Number of Sequences: 5004
Number of extensions: 49625
Number of successful extensions: 218
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 218
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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