Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt22a04
(730 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 27 0.24
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 2.2
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 2.2
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 5.2
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 22 5.2
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 6.8
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 6.8
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 6.8
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 6.8
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 21 9.0
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 9.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.0
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 26.6 bits (56), Expect = 0.24
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -2
Query: 513 HQLVPSYQLTHHLHHQWNQY*SS*ILFSFVLHHPSLQILWYECPSMSALHNL 358
H+ +P YQ HHLHH Y S L + +P + + E P+ L L
Sbjct: 64 HRDLPIYQSHHHLHHHQVLYQQSPYL---MYENPDEEKRYQEHPNGKILREL 112
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 2.2
Identities = 18/68 (26%), Positives = 28/68 (41%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQS 341
R+ EQK K + E RKY RE + S + K+ K+ +N + +
Sbjct: 41 RSREREQKSYKNEREYRKY-------RETSKERSQDRTERETSKEPKIISSLSNNYKYSN 93
Query: 342 FNMEQANY 365
+N NY
Sbjct: 94 YNNYNNNY 101
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 2.2
Identities = 18/68 (26%), Positives = 28/68 (41%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQS 341
R+ EQK K + E RKY RE + S + K+ K+ +N + +
Sbjct: 41 RSREREQKSYKNEREYRKY-------RETSKERSQDRTERETSKEPKIISSLSNNYKYSN 93
Query: 342 FNMEQANY 365
+N NY
Sbjct: 94 YNNYNNNY 101
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.2
Identities = 18/74 (24%), Positives = 29/74 (39%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLDNLRAQS 341
R+ EQK+ K E RKY+ + SK R + K +++ + +
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKIISNNNSLSNNYN--YNNN 97
Query: 342 FNMEQANYATQTLK 383
+N NY T K
Sbjct: 98 YNNYNNNYNTNYKK 111
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.2 bits (45), Expect = 5.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVL 290
R+ EQK K + E RKY+ + SK R + + K +++
Sbjct: 274 RSREREQKSYKNEREYRKYR-ETSKERFRDRRERERSKESKII 315
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLD-NLRAQ 338
R+ EQK+ K E RKY+ + SK R + K +++ + N
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYN 99
Query: 339 SFNMEQAN 362
++N N
Sbjct: 100 NYNKHNYN 107
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLD-NLRAQ 338
R+ EQK+ K E RKY+ + SK R + K +++ + N
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYN 99
Query: 339 SFNMEQAN 362
++N N
Sbjct: 100 NYNKHNYN 107
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLD-NLRAQ 338
R+ EQK+ K E RKY+ + SK R + K +++ + N
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYN 99
Query: 339 SFNMEQAN 362
++N N
Sbjct: 100 NYNKHNYN 107
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLD-NLRAQ 338
R+ EQK+ K E RKY+ + SK R + K +++ + N
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYN 99
Query: 339 SFNMEQAN 362
++N N
Sbjct: 100 NYNKHNYN 107
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLD-NLRAQ 338
R+ EQK+ K E RKY+ + SK R + K +++ + N
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYN 99
Query: 339 SFNMEQAN 362
++N N
Sbjct: 100 NYNKHNYN 107
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLD-NLRAQ 338
R+ EQK+ K E RKY+ + SK R + K +++ + N
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYN 99
Query: 339 SFNMEQAN 362
++N N
Sbjct: 100 NYNKHNYN 107
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLD-NLRAQ 338
R+ EQK+ K E RKY+ + SK R + K +++ + N
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYN 99
Query: 339 SFNMEQAN 362
++N N
Sbjct: 100 NYNKHNYN 107
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.8
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLD-NLRAQ 338
R+ EQK+ K E RKY+ + SK R + K +++ + N
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYN 99
Query: 339 SFNMEQAN 362
++N N
Sbjct: 100 NYNKHNYN 107
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.8
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLD-NLRAQ 338
R+ EQK+ K E RKY+ + SK R + K +++ + N
Sbjct: 274 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYN 332
Query: 339 SFNMEQAN 362
++N N
Sbjct: 333 NYNKHNYN 340
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 6.8
Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVLKQKKMYEQQLD-NLRAQ 338
R+ EQK+ K E RKY+ + SK R + K +++ + N
Sbjct: 274 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKIISNNNSLSNNYNYNNNYN 332
Query: 339 SFNMEQAN 362
++N N
Sbjct: 333 NYNKHNYN 340
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -1
Query: 313 CSYIFFCFNTLIAFCLT 263
C FFC N + ++C T
Sbjct: 284 CWVPFFCVNIVTSYCKT 300
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.0
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +3
Query: 162 RADNIEQKVQKLDTELRKYKDQMSKMREGPAKNSVKQKAMRVL 290
R+ EQK+ K E RKY+ + SK R + K +++
Sbjct: 41 RSREREQKLYKNKREYRKYR-ETSKERSRNRTERERSKEPKII 82
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -1
Query: 427 CVTPSFIAD 401
CV PSF+AD
Sbjct: 124 CVVPSFVAD 132
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,527
Number of Sequences: 438
Number of extensions: 3154
Number of successful extensions: 24
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -