Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21o11
         (702 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.6  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   2.1  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.1  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   6.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   6.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   6.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   6.5  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -2

Query: 179 SHVL-LSWTGRRRLCFQVLNELSQPMLCRIVFLK 81
           +H L ++W  RR++  ++LN LS   L +I+ ++
Sbjct: 499 THTLDVAW--RRKVTIEILNSLSATKLSKIILMQ 530


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 11/34 (32%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = -2

Query: 179 SHVL-LSWTGRRRLCFQVLNELSQPMLCRIVFLK 81
           +H L ++W  RR++  ++LN LS   L +I+ ++
Sbjct: 537 THTLDVAW--RRKVTIEILNSLSATKLSKIILMQ 568


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 409 CSQKFITFHISSLKNIKMIE 350
           CS K +TF + + K +K +E
Sbjct: 156 CSPKLLTFDLKTSKLVKQVE 175


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 6   DNPRAREALRQCLPDQLRDATFTACL 83
           DN R  + LR C+ + LR    T C+
Sbjct: 373 DNLRKAKYLRACITESLRLIPTTTCI 398


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 409 CSQKFITFHISSLKNIKMIE 350
           CS K +TF +++ + +K +E
Sbjct: 150 CSPKLLTFDLTTSQLLKQVE 169


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 92  VFLKACCKSCITELVWQALS 33
           +FL AC  SC+  +V+ A +
Sbjct: 301 LFLFACTNSCMNPIVYGAFN 320


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 409 CSQKFITFHISSLKNIKMIE 350
           CS K +TF +++ + +K +E
Sbjct: 150 CSPKLLTFDLTTSQLLKQVE 169


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 409 CSQKFITFHISSLKNIKMIE 350
           CS K +TF +++ + +K +E
Sbjct: 150 CSPKLLTFDLTTSQLLKQVE 169


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,175
Number of Sequences: 438
Number of extensions: 3527
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)