Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21o08
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.0  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.0  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.0  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   6.9  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   9.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.1  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   9.1  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   9.1  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = +2

Query: 575 VESGKQEQVLDTRGKFTLSVAYSPDGKYIAS 667
           ++   +E  LDT+  + L+VA + DG+  A+
Sbjct: 135 IDPDLKELNLDTKESYALTVAETADGRLNAT 165


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -2

Query: 533 HVFHLVKSLKSKRR*VQFQTFLVFHPRSNSIVSMMNPVSCLLRF 402
           +V  L  +LK K+  + F+T     PR +S+V ++   +  L F
Sbjct: 149 NVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLVQLILTQAIFLMF 192


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -2

Query: 533 HVFHLVKSLKSKRR*VQFQTFLVFHPRSNSIVSMMNPVSCLLRF 402
           +V  L  +LK K+  + F+T     PR +S+V ++   +  L F
Sbjct: 75  NVNSLTLTLKRKKWNLLFKTLTHDEPRKSSLVQLILTQAIFLMF 118


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -3

Query: 586 TTF-NSKNEYFPCIASRNNMFSI 521
           +TF N+++EY  C   RNN   I
Sbjct: 392 STFRNNRDEYNVCFRPRNNSILI 414


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 624 VNFPLVSNTCSCLPLSTPK 568
           VN P V + C C P  T K
Sbjct: 45  VNLPGVGHRCQCQPGFTGK 63


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 443 IVSMMNPVSCLLRFSHR 393
           IV + + + CL+ F+HR
Sbjct: 15  IVFVQSEIFCLVNFNHR 31


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 472 NV*NWTHRRLDFRLFTRWKTCYFWKQC 552
           NV ++  R    + FTRW+    W  C
Sbjct: 164 NVCSYVVRDKLLKAFTRWRMEGDWSDC 190


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -1

Query: 555 PALLPEITCFPSGEKSKVQTSVSPVSNIFSFSPEIK 448
           PA  P     P+G  +   ++  P  NI   SP+++
Sbjct: 211 PAAAPRSVATPTGIPTPSTSASPPTVNIKKESPQMQ 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,040
Number of Sequences: 336
Number of extensions: 3579
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)