Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21n08
         (699 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC068439-1|AAH68439.1|  480|Homo sapiens chromosome 19 open read...   177   2e-44
BC036706-1|AAH36706.1|  471|Homo sapiens C19orf28 protein protein.    153   8e-37
S62035-1|AAB26881.1|  489|Homo sapiens Ras-specific guanine nucl...    32   2.3  
L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein.                  32   2.3  
BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein.      32   2.3  
AB065892-1|BAC06108.1|  347|Homo sapiens seven transmembrane hel...    31   5.2  

>BC068439-1|AAH68439.1|  480|Homo sapiens chromosome 19 open reading
           frame 28 protein.
          Length = 480

 Score =  177 bits (432), Expect = 2e-44
 Identities = 79/144 (54%), Positives = 102/144 (70%), Gaps = 1/144 (0%)
 Frame = +1

Query: 268 SLKLQLGYGIGHVLNDVCASLWFTYFLVYFKLVLEFSNVQSGTLMLVGQMVDALATPFIG 447
           SL  +L Y +GH LND+CAS+WFTY L+Y   V  +S+  +G L+L+GQ+ D L TP +G
Sbjct: 18  SLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVG 77

Query: 448 YHSDHTDNFWSAKYGRRKLWHLFGTICVVTSFPFIFSECVGC-SLTHRWAQMYYFAAFIV 624
           Y +D   +   A+YG RK WHL GT+CV+ SFPFIFS C+GC + T  WA + Y+  FIV
Sbjct: 78  YEADRAAS-CCARYGPRKAWHLVGTVCVLLSFPFIFSPCLGCGAATPEWAALLYYGPFIV 136

Query: 625 IFQIGWAAVQISHLSLIPELAQDD 696
           IFQ GWA+ QISHLSLIPEL  +D
Sbjct: 137 IFQFGWASTQISHLSLIPELVTND 160


>BC036706-1|AAH36706.1|  471|Homo sapiens C19orf28 protein protein.
          Length = 471

 Score =  153 bits (370), Expect = 8e-37
 Identities = 73/144 (50%), Positives = 96/144 (66%), Gaps = 1/144 (0%)
 Frame = +1

Query: 268 SLKLQLGYGIGHVLNDVCASLWFTYFLVYFKLVLEFSNVQSGTLMLVGQMVDALATPFIG 447
           SL  +L Y +GH LND+CAS+WFTY L+Y   V  +S+  +G L+L+GQ+ D L TP +G
Sbjct: 18  SLVARLSYAVGHFLNDLCASMWFTYLLLYLHSVRAYSSRGAGLLLLLGQVADGLCTPLVG 77

Query: 448 YHSDHTDNFWSAKYGRRKLWHLFGTICVVTSFPFIFSECVGC-SLTHRWAQMYYFAAFIV 624
           Y +D   +   A+Y         GT+CV+ SFPFIFS C+GC + T  WA + Y+  FIV
Sbjct: 78  YEADRAAS-CCARY---------GTVCVLLSFPFIFSPCLGCGAATPEWAALLYYGPFIV 127

Query: 625 IFQIGWAAVQISHLSLIPELAQDD 696
           IFQ GWA+ QISHLSLIPEL  +D
Sbjct: 128 IFQFGWASTQISHLSLIPELVTND 151


>S62035-1|AAB26881.1|  489|Homo sapiens Ras-specific guanine
           nucleotide-releasing factor protein.
          Length = 489

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 137 YCVKQCKVNNQNSGTQSLVVLRNSDIKQKQESI-KWITNL*IYRQVSNYNWAMELVT 304
           Y +K  K  N  S   +  ++RN DI  +  +I KW+    I R + NYN  +E+ +
Sbjct: 294 YIMKTTKHFNDISNLIASEIIRNEDINARVSAIEKWVAVADICRCLHNYNAVLEITS 350


>L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein.
          Length = 1275

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 137  YCVKQCKVNNQNSGTQSLVVLRNSDIKQKQESI-KWITNL*IYRQVSNYNWAMELVT 304
            Y +K  K  N  S   +  ++RN DI  +  +I KW+    I R + NYN  +E+ +
Sbjct: 1080 YIMKTTKHFNDISNLIASEIIRNEDINARVSAIEKWVAVADICRCLHNYNAVLEITS 1136


>BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein.
          Length = 1181

 Score = 31.9 bits (69), Expect = 2.3
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +2

Query: 137  YCVKQCKVNNQNSGTQSLVVLRNSDIKQKQESI-KWITNL*IYRQVSNYNWAMELVT 304
            Y +K  K  N  S   +  ++RN DI  +  +I KW+    I R + NYN  +E+ +
Sbjct: 1062 YIMKTTKHFNDISNLIASEIIRNEDINARVSAIEKWVAVADICRCLHNYNAVLEITS 1118


>AB065892-1|BAC06108.1|  347|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 347

 Score = 30.7 bits (66), Expect = 5.2
 Identities = 13/30 (43%), Positives = 20/30 (66%)
 Frame = -2

Query: 269 LVDISINSLSILCFLVSVLYHYFLVLLAIV 180
           L+D  ++S+ ILC +V V Y Y  ++L IV
Sbjct: 196 LMDFMLSSMVILCCIVLVAYSYTYIILTIV 225


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,575,052
Number of Sequences: 237096
Number of extensions: 2159261
Number of successful extensions: 3422
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3418
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)