Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt21m04
(713 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672... 60 2e-09
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991... 56 2e-08
11_01_0557 + 4394754-4396040 51 1e-06
01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821... 50 1e-06
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133... 50 2e-06
09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069... 36 0.032
06_02_0169 - 12535102-12536062,12536949-12537646 36 0.032
03_01_0256 - 1992298-1993878 33 0.17
04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019 33 0.23
03_01_0355 - 2789680-2791263 33 0.23
06_02_0166 + 12522172-12522890,12523567-12524596 33 0.30
03_01_0357 - 2797523-2799109 33 0.30
12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106 32 0.52
10_08_0183 - 15522241-15523866 32 0.52
10_08_0182 + 15513693-15515273 32 0.52
01_06_0127 - 26718452-26718989,26719082-26720211 31 0.69
04_01_0445 + 5812277-5813893 30 1.6
04_01_0443 - 5776275-5777921 30 1.6
08_02_1613 + 28236989-28238593 30 2.1
03_01_0354 + 2785998-2787623 30 2.1
06_03_0126 + 16978566-16979104,16979279-16979365,16979481-169795... 29 4.8
02_03_0205 - 16411707-16412759,16413077-16413256,16413960-164144... 28 8.5
>09_06_0351 +
22466160-22466217,22466514-22467052,22467186-22467293,
22467391-22467546,22467916-22468131,22468639-22468776,
22468880-22468981,22469089-22469146,22469346-22469408,
22469543-22469640
Length = 511
Score = 59.7 bits (138), Expect = 2e-09
Identities = 30/106 (28%), Positives = 54/106 (50%)
Frame = +3
Query: 396 YDWDMSIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWLVEWG 575
+ W + ++ +FF GY + + GI + R GGK+ F ++ I +++TP L
Sbjct: 213 FGWSPATVGLIQSSFFWGYLLTQILGGIWADRFGGKVVLGFGVVWWSIATVLTP-LAAKI 271
Query: 576 GWKAVCGCRFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIYTG 713
G + R GI + P++ ++LSKWVP +E + +Y+G
Sbjct: 272 GLPFLLVMRAFMGIGEGVAMPAMNNILSKWVPVSERSRSLALVYSG 317
>01_01_1227 +
9912646-9913056,9913306-9913413,9913517-9913672,
9914110-9914325,9914436-9914645,9914722-9914859,
9915076-9915177,9915508-9915603
Length = 478
Score = 56.4 bits (130), Expect = 2e-08
Identities = 27/106 (25%), Positives = 52/106 (49%)
Frame = +3
Query: 396 YDWDMSIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWLVEWG 575
+ W+ ++ +FF GY + + GI + GGK F ++ I + +TP+ +
Sbjct: 151 FGWNPQTVGLIQSSFFWGYLLTQIAGGIWADTVGGKTVLGFGVIWWSIATALTPFAAKL- 209
Query: 576 GWKAVCGCRFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIYTG 713
G + R G+ + P++ ++LSKWVP +E + +Y+G
Sbjct: 210 GLPFLLVTRAFMGVGEGVAMPAMNNILSKWVPVSERSRSLALVYSG 255
>11_01_0557 + 4394754-4396040
Length = 428
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/86 (30%), Positives = 45/86 (52%)
Frame = +3
Query: 423 MVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWLVEWGGWKAVCGCR 602
M+L F+ GY + +P G +QR GG++ S ++ V P ++ + R
Sbjct: 47 MILSMFYYGYVLSQIPGGWAAQRLGGRLVLLLSFVLWSSICAVVP--LDPNRVILLVLSR 104
Query: 603 FLQGISQSGTYPSIQSLLSKWVPANE 680
L G++Q +PSI ++L++WVP E
Sbjct: 105 LLVGVAQGLIFPSIHTVLAQWVPPQE 130
>01_06_1363 -
36681605-36681789,36681875-36681908,36682017-36682154,
36682578-36682724,36682821-36682865,36683043-36683331,
36683443-36683669,36684109-36684528
Length = 494
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/97 (24%), Positives = 43/97 (44%)
Frame = +3
Query: 390 QVYDWDMSIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWLVE 569
Q Y W S +V +F GY + + G L GGK + + + + + ++PW
Sbjct: 127 QAYGWTPSFAGVVQSSFLWGYLVSPIIGGALVDYYGGKRVMAYGVALWSLATFLSPWAAA 186
Query: 570 WGGWKAVCGCRFLQGISQSGTYPSIQSLLSKWVPANE 680
W R L G+++ PS+ +++ +W P E
Sbjct: 187 RSLW-LFLSTRVLLGMAEGVALPSMNNMVLRWFPRTE 222
>05_05_0059 +
22011168-22011662,22012668-22012894,22013029-22013377,
22013464-22013508,22013589-22013735,22013851-22013988,
22014126-22014159,22014258-22014430
Length = 535
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/95 (26%), Positives = 43/95 (45%)
Frame = +3
Query: 396 YDWDMSIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWLVEWG 575
Y W S +V +F GY + G L+ R GGK + + + + +TPW
Sbjct: 154 YGWSSSFLGIVQSSFLWGYVFSSMVGGALADRYGGKKVMAGAAALWSLATFLTPWAAS-Q 212
Query: 576 GWKAVCGCRFLQGISQSGTYPSIQSLLSKWVPANE 680
+ R L G+++ +P++ + L KW P +E
Sbjct: 213 STIMLLAIRALFGLAEGVAFPTMSTFLPKWFPTHE 247
>09_06_0242 -
21806370-21806483,21806574-21806660,21806865-21806917,
21806999-21807140,21807406-21807501,21808617-21808785,
21808859-21808939,21809032-21809106,21810322-21810387,
21811013-21811158,21811898-21812344
Length = 491
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 396 YDWDMSIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTP 557
Y W+ S +V +FF GY + +P G L++ GG+ + ++ + + + P
Sbjct: 163 YGWNSSTAGLVQSSFFWGYALSQLPGGWLAKLFGGRRVLEIGVVAWSLATAIIP 216
>06_02_0169 - 12535102-12536062,12536949-12537646
Length = 552
Score = 35.9 bits (79), Expect = 0.032
Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Frame = +3
Query: 411 SIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWLV---EWGGW 581
++ +G G IG V G L R G + + LL+ +S+ + + V
Sbjct: 65 AVVSATVGVALLGAVIGNVVFGALGDRVGRRRVYGACLLLMVCSSVGSGFSVCRTRRCAL 124
Query: 582 KAVCGCRFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIYT 710
++C RFL G+ G YP +++S++ GAF + +++
Sbjct: 125 ASLCFFRFLLGVGVGGDYPLSATIMSEFANRRTRGAFIAAVFS 167
>03_01_0256 - 1992298-1993878
Length = 526
Score = 33.5 bits (73), Expect = 0.17
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Frame = +3
Query: 411 SIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWL---VEWGGW 581
++ V G F G G + G L R G K + +LL+ I S+ +
Sbjct: 68 NVSAAVNGVAFVGTLTGQLFFGWLGDRVGRKSVYGMTLLLMIICSVASGLSFGDTPTSVM 127
Query: 582 KAVCGCRFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIY 707
+C RF G G YP +++S++ GAF + ++
Sbjct: 128 ATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVF 169
>04_01_0449 + 5830017-5830272,5830376-5830620,5831994-5833019
Length = 508
Score = 33.1 bits (72), Expect = 0.23
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 4/103 (3%)
Frame = +3
Query: 411 SIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPW-LVEWGGWKA 587
+I V G G G + G L + G K + +LL+ ++S+ + + G
Sbjct: 62 NIHAAVTGIALCGTVPGQLVFGWLGDKMGRKRVYGITLLLMVVSSLASGLSFSKHEGMNI 121
Query: 588 V---CGCRFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIY 707
+ C RF G+S G YP +++S++ GAF + ++
Sbjct: 122 IAVLCFFRFWLGVSIGGDYPLSATIMSEYANKRTRGAFIAAVF 164
>03_01_0355 - 2789680-2791263
Length = 527
Score = 33.1 bits (72), Expect = 0.23
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = +3
Query: 411 SIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWLV---EWGGW 581
++ V G G G + G L + G K + F+L++ + S+ + G
Sbjct: 68 NVSAAVTGVALCGTLAGQLFFGWLGDKLGRKSVYGFTLILMVVCSVASGLSFGSSAKGVV 127
Query: 582 KAVCGCRFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIY 707
+C RF G G YP +++S++ GAF + ++
Sbjct: 128 STLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVF 169
>06_02_0166 + 12522172-12522890,12523567-12524596
Length = 582
Score = 32.7 bits (71), Expect = 0.30
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Frame = +3
Query: 411 SIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWLV---EWGGW 581
++ +G G G V G L R G + + LL+ +S+ + V
Sbjct: 72 AVVSATVGVALLGAVAGNVVFGALGDRVGRRRVYGACLLLMVCSSVGSGLSVCRTRRCAL 131
Query: 582 KAVCGCRFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIYT 710
++C RFL G+ G YP +++S++ GAF + +++
Sbjct: 132 ASLCFFRFLLGVGVGGDYPLSATIMSEFANRRTRGAFIAAVFS 174
>03_01_0357 - 2797523-2799109
Length = 528
Score = 32.7 bits (71), Expect = 0.30
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Frame = +3
Query: 411 SIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWLVEWGGW-KA 587
++ V G G G + G L + G K + F+L++ + SI + + +G K+
Sbjct: 68 NVSSAVTGVALCGTLAGQLFFGWLGDKLGRKSVYGFTLILMVVCSIASG--LSFGHTPKS 125
Query: 588 V----CGCRFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIY 707
V C RF G G YP +++S++ GAF + ++
Sbjct: 126 VIATLCFFRFWLGFGIGGDYPLSATIMSEYASKKTRGAFIAAVF 169
>12_01_0510 + 4042321-4042411,4044653-4044723,4044985-4046106
Length = 427
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/72 (25%), Positives = 36/72 (50%)
Frame = +3
Query: 465 VPSGILSQRCGGKISFQFSLLINGITSIVTPWLVEWGGWKAVCGCRFLQGISQSGTYPSI 644
+P G +QR GG+ S ++ + + P ++ + R G++Q +P+I
Sbjct: 55 IPGGWAAQRIGGRRVLLLSFVLWSLICGLIP--LDPKREVILVLSRLFVGVAQGFIFPAI 112
Query: 645 QSLLSKWVPANE 680
++L++WVP E
Sbjct: 113 HTVLAQWVPPQE 124
>10_08_0183 - 15522241-15523866
Length = 541
Score = 31.9 bits (69), Expect = 0.52
Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Frame = +3
Query: 411 SIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWLVEW---GGW 581
++ V G F G G + G L + G K + +LL+ I SI +
Sbjct: 72 NVAAAVNGVAFCGTLAGQLFFGWLGDKLGRKSVYGMTLLMMVICSIASGLSFSHTPTSVM 131
Query: 582 KAVCGCRFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIY 707
+C RF G G YP +++S++ GAF + ++
Sbjct: 132 ATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVF 173
>10_08_0182 + 15513693-15515273
Length = 526
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/102 (22%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = +3
Query: 411 SIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWL---VEWGGW 581
++ V G G G + G L + G K + F+L++ + S+ + G
Sbjct: 68 NVSAAVNGVALCGTLAGQLFFGWLGDKLGRKSVYGFTLVLMVVCSVASGLSFGRTAKGVV 127
Query: 582 KAVCGCRFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIY 707
+C RF G G YP +++S++ GAF + ++
Sbjct: 128 ATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVF 169
>01_06_0127 - 26718452-26718989,26719082-26720211
Length = 555
Score = 31.5 bits (68), Expect = 0.69
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Frame = +3
Query: 423 MVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWLVEWGGWKAVCG-- 596
MV+G G +G + G + G K + +L++ +I + L KAV G
Sbjct: 78 MVIGVALVGTLMGQLVFGYFGDKLGRKRVYGVTLILMAACAIGSG-LSFGSSRKAVIGTL 136
Query: 597 C--RFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIY 707
C RF G G YP +++S++ GAF + ++
Sbjct: 137 CFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVF 175
>04_01_0445 + 5812277-5813893
Length = 538
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Frame = +3
Query: 411 SIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWLV---EWGGW 581
++ V G F G G + G L + G K + +L++ I + + G
Sbjct: 67 NVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKKVYGMTLMLMVICCLASGLSFGSSAKGVM 126
Query: 582 KAVCGCRFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIY 707
+C RF G G YP +++S++ GAF + ++
Sbjct: 127 ATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVF 168
>04_01_0443 - 5776275-5777921
Length = 548
Score = 30.3 bits (65), Expect = 1.6
Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Frame = +3
Query: 411 SIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWLV---EWGGW 581
++ V G F G G + G L + G K + +L++ I + + G
Sbjct: 67 NVSAAVNGVAFCGTLAGQLFFGWLGDKMGRKKVYGMTLMLMVICCLASGLSFGSSAKGVM 126
Query: 582 KAVCGCRFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIY 707
+C RF G G YP +++S++ GAF + ++
Sbjct: 127 ATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVF 168
>08_02_1613 + 28236989-28238593
Length = 534
Score = 29.9 bits (64), Expect = 2.1
Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 3/101 (2%)
Frame = +3
Query: 414 IQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWL---VEWGGWK 584
+ V G F G G + G L + G K + +L++ + S+ +
Sbjct: 74 VSASVNGVAFVGTLSGQLFFGWLGDKLGRKRVYGITLMLMVLCSLASALSFGHTPTSVMA 133
Query: 585 AVCGCRFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIY 707
+C RF G G YP +++S++ GAF + ++
Sbjct: 134 TLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVF 174
>03_01_0354 + 2785998-2787623
Length = 541
Score = 29.9 bits (64), Expect = 2.1
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 3/102 (2%)
Frame = +3
Query: 411 SIQEMVLGAFFTGYCIGMVPSGILSQRCGGKISFQFSLLINGITSIVTPWLVEW---GGW 581
+I V G G G + G L + G K + +LL+ I SI +
Sbjct: 70 NIAAAVNGVALCGTLSGQLFFGWLGDKLGRKSVYGMTLLLMVICSIASGLSFSHTPTSVM 129
Query: 582 KAVCGCRFLQGISQSGTYPSIQSLLSKWVPANELGAFPSYIY 707
+C RF G G YP +++S++ GAF + ++
Sbjct: 130 ATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVF 171
>06_03_0126 +
16978566-16979104,16979279-16979365,16979481-16979537,
16979648-16979886,16981776-16981894,16982010-16982096,
16983898-16983971,16984483-16984547,16984581-16984961,
16985136-16985401
Length = 637
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = +2
Query: 92 KQFGTYSP-IALRMWSPTHTVRYIFTVHDRCVHSAQPSWSHDSSHDEYISE 241
K+ G SP L WS +H R ++ P W HD S D Y E
Sbjct: 375 KEVGQQSPRCRLTPWSQKMDKN--LRLHGRLLNLGLPFWGHDESSDSYNKE 423
>02_03_0205 -
16411707-16412759,16413077-16413256,16413960-16414498,
16414798-16414825
Length = 599
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 21 ENTSNKKMSEKSSDYCKVPTNEILNSLE 104
+NT N KM + +YCKV IL+ L+
Sbjct: 449 QNTDNVKMRDIYHEYCKVKFPSILHGLD 476
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,749,125
Number of Sequences: 37544
Number of extensions: 431071
Number of successful extensions: 1159
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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