Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21m04
         (713 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    25   0.71 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.94 
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   2.2  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    23   2.2  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   2.2  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   5.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   6.6  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    21   8.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.8  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 8/33 (24%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -2

Query: 571 HSTNHGVTILVMP-LISSENWNEILPPHRWLRI 476
           H   + VT+ ++P L+  ++W  ++  H W+ +
Sbjct: 65  HQIANNVTMQLLPKLMEFDDWTSVMELHSWMTL 97


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -1

Query: 500 TTASLAQNSTRYHTYAIASEERSQHHFLYTH 408
           TTA+ A  +T   T  I  E   +HH L  H
Sbjct: 117 TTATAAATATTTATGLIKQETLQRHHHLQNH 147


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +3

Query: 177 VAFIARSHLGVTIVAMTNISQKNVTN 254
           + ++   +LG+T   +T+I  +N+TN
Sbjct: 2   IRWLLLMYLGITCQGVTDIHSRNLTN 27


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/28 (25%), Positives = 18/28 (64%)
 Frame = -2

Query: 226 VMATIVTPRWLRAMNATVMHSKNITNCM 143
           ++ T +T +WL+  +   +  K+++NC+
Sbjct: 195 LVETDMTAQWLKENSRLALKPKDVSNCV 222


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 149 VRYIFTVHDRCVHSAQPSWSHDSSHDE 229
           +R + T +DR +H   PS+  D S D+
Sbjct: 109 LRELQTDYDRRLHDNSPSFLSDHSRDQ 135


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 267 NVTEQIDTNSIFSEAEFIGISETDELNNNTEAENS 371
           N+ +QI   S  +E+EF G S   + N N + +N+
Sbjct: 5   NICKQILKRS--AESEFEGASSPKKRNKNPQPKNA 37


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 680 FICWNPFR**RLDARVSSRLRNSLEE 603
           FICW PF   RL A  +   ++  E+
Sbjct: 295 FICWAPFHAQRLLAVYAQNSKDKPED 320


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 18  YENTSNKKMSEKSSDYCKVPTNEILNSLERTVPSHYGCG 134
           Y N  N   +  +++Y K+    I+N  +  VP    CG
Sbjct: 94  YNNNYNNYNNNYNTNYKKLQYYNIINIEQIPVPVPIYCG 132


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +3

Query: 291 NSIFSEAEFIGISETDELNNNTEAENSTSKHE 386
           N+ FS+ E   +S+T   +N   ++NS S  E
Sbjct: 326 NNPFSDVEERRVSKTAMNSNQIVSDNSLSSSE 357


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,832
Number of Sequences: 438
Number of extensions: 5215
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)