Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt21m03
(752 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 24 1.8
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 24 1.8
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 23 4.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 4.1
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 4.1
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 23 4.1
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 4.1
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 4.1
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 4.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 4.1
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 5.4
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 22 5.4
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 22 5.4
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 22 5.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 22 5.4
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 7.1
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.4
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 9.4
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 9.4
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 9.4
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 23.8 bits (49), Expect = 1.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 374 YQSRRTFNIVSKILPRHEDKE 436
YQ RTFN+V L + DKE
Sbjct: 56 YQKARTFNLVEN-LDNYNDKE 75
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 23.8 bits (49), Expect = 1.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 374 YQSRRTFNIVSKILPRHEDKE 436
YQ RTFN+V L + DKE
Sbjct: 56 YQKARTFNLVEN-LDNYNDKE 75
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 80 WFNRQVILDTSIPLSLVFLIF 142
WF +I +SIPL +FLIF
Sbjct: 168 WFFLDLI--SSIPLDYIFLIF 186
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 80 WFNRQVILDTSIPLSLVFLIF 142
WF +I +SIPL +FLIF
Sbjct: 168 WFFLDLI--SSIPLDYIFLIF 186
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 113 IPLSLVFLIFLPQFPPQSVNVFFNI*KIVSE-RYI 214
IP+ + F ++ FPP+ + F +I + + RYI
Sbjct: 344 IPVPVPFPVYYGNFPPRPMGPFVSIQEQIPRFRYI 378
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 113 IPLSLVFLIFLPQFPPQSVNVFFNI*KIVSE-RYI 214
IP+ + F ++ FPP+ + F +I + + RYI
Sbjct: 344 IPVPVPFPVYYGNFPPRPMGPFVSIQEQIPRFRYI 378
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 113 IPLSLVFLIFLPQFPPQSVNVFFNI*KIVSE-RYI 214
IP+ + F ++ FPP+ + F +I + + RYI
Sbjct: 344 IPVPVPFPVYYGNFPPRPMGPFVSIQEQIPRFRYI 378
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 113 IPLSLVFLIFLPQFPPQSVNVFFNI*KIVSE-RYI 214
IP+ + F ++ FPP+ + F +I + + RYI
Sbjct: 344 IPVPVPFPVYYGNFPPRPMGPFVSIQEQIPRLRYI 378
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/35 (31%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 113 IPLSLVFLIFLPQFPPQSVNVFFNI*KIVSE-RYI 214
IP+ + F ++ FPP+ + F +I + + RYI
Sbjct: 333 IPVPVPFPVYYGNFPPRPMGPFVSIQEQIPRFRYI 367
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 80 WFNRQVILDTSIPLSLVFLIF 142
WF +I +SIPL +FLIF
Sbjct: 168 WFFLDLI--SSIPLDYIFLIF 186
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.2 bits (45), Expect = 5.4
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = +3
Query: 201 VKDILWTKVVYI 236
V+D++WT VY+
Sbjct: 93 VRDLIWTPTVYV 104
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/38 (21%), Positives = 20/38 (52%)
Frame = +2
Query: 74 IPWFNRQVILDTSIPLSLVFLIFLPQFPPQSVNVFFNI 187
+ ++N I +P+ + ++ FPP+S+ + +I
Sbjct: 100 LQYYNINYIEQIPVPVPVPVPVYYGNFPPRSMGPWISI 137
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/38 (21%), Positives = 20/38 (52%)
Frame = +2
Query: 74 IPWFNRQVILDTSIPLSLVFLIFLPQFPPQSVNVFFNI 187
+ ++N I +P+ + ++ FPP+S+ + +I
Sbjct: 100 LQYYNINYIEQIPVPVPVPVPVYYGNFPPRSMGPWISI 137
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/38 (21%), Positives = 20/38 (52%)
Frame = +2
Query: 74 IPWFNRQVILDTSIPLSLVFLIFLPQFPPQSVNVFFNI 187
+ ++N I +P+ + ++ FPP+S+ + +I
Sbjct: 100 LQYYNINYIEQIPVPVPVPVPVYYGNFPPRSMGPWISI 137
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/38 (21%), Positives = 20/38 (52%)
Frame = +2
Query: 74 IPWFNRQVILDTSIPLSLVFLIFLPQFPPQSVNVFFNI 187
+ ++N I +P+ + ++ FPP+S+ + +I
Sbjct: 333 LQYYNINYIEQIPVPVPVPVPVYYGNFPPRSMGPWISI 370
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 95 VILDTSIPLSLVFLIFLPQFPPQSVN 172
+ L ++IP ++ + L ++PP+S N
Sbjct: 168 IALISAIPFAIYTKVNLVEYPPESGN 193
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 113 IPLSLVFLIFLPQFPPQSVNVFFNI*KIVSE-RYI 214
IP+ + F ++ FPP+ + F ++ + + RYI
Sbjct: 111 IPVPVPFPVYYGNFPPRPMGPFVSMQEQIPRFRYI 145
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 113 IPLSLVFLIFLPQFPPQSVNVFFNI*KIVSE-RYI 214
IP+ + F ++ FPP+ + F ++ + + RYI
Sbjct: 111 IPVPVPFPVYYGNFPPRPMGPFVSMQEQIPRFRYI 145
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 113 IPLSLVFLIFLPQFPPQSVNVFFNI*KIVSE-RYI 214
IP+ + F ++ FPP+ + F ++ + + RYI
Sbjct: 111 IPVPVPFPVYYGNFPPRPMGPFVSMQEQIPRFRYI 145
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 113 IPLSLVFLIFLPQFPPQSVNVFFNI*KIVSE-RYI 214
IP+ + F ++ FPP+ + F ++ + + RYI
Sbjct: 111 IPVPVPFPVYYGNFPPRPMGPFVSMQEQIPRFRYI 145
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 207 DILWTKVVYI 236
+I WTKV+Y+
Sbjct: 250 EIAWTKVIYV 259
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 207 DILWTKVVYI 236
+I WTKV+Y+
Sbjct: 250 EIAWTKVIYV 259
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +3
Query: 207 DILWTKVVYI 236
+I WTKV+Y+
Sbjct: 250 EIAWTKVIYV 259
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,078
Number of Sequences: 438
Number of extensions: 4949
Number of successful extensions: 30
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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