Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21j13
         (742 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    25   0.75 
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    25   0.75 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    24   1.3  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    24   1.3  
AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    24   1.3  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   3.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   7.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   7.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   7.0  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   9.2  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -2

Query: 336 CQLSSASQACFSEELLFVHHRGSSCHHLTTLHPCPIPRHQYCTLWQNVKTSLG 178
           C L  AS    +++L+F+   G     +  LH       ++ T + N KT+ G
Sbjct: 174 CSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLEKFFTDYCNSKTNTG 226


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -2

Query: 336 CQLSSASQACFSEELLFVHHRGSSCHHLTTLHPCPIPRHQYCTLWQNVKTSLG 178
           C L  AS    +++L+F+   G     +  LH       ++ T + N KT+ G
Sbjct: 174 CSLRMASYGWTTDDLVFLWKEGDPVQVVKNLHLPRFTLEKFFTDYCNSKTNTG 226


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +3

Query: 375 VMFLGNLDEIVKKFKSFPDTRVLFSAEQFC 464
           +M   + D +VK FK+F D + L+   + C
Sbjct: 419 IMGEADCDFVVKLFKTFKDRKYLYMLMEAC 448


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 546 YLPEIYEIINSNPIKDKDDDQLYYTKIYLDKDLRESLKITLDHKSEIFXN 695
           +  +++EII     K  D+D+    + Y+D  L E +K   D   +I  N
Sbjct: 88  FTEDVHEIIEQCVSKAADEDECMVARKYIDCAL-EKMKFLDDELEKIAGN 136


>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +3

Query: 546 YLPEIYEIINSNPIKDKDDDQLYYTKIYLDKDLRESLKITLDHKSEIFXN 695
           +  +++EII     K  D+D+    + Y+D  L E +K   D   +I  N
Sbjct: 88  FTEDVHEIIEQCVSKAADEDECMVARKYIDCAL-EKMKFLDDELEKIAGN 136


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 443 FFC*TILLA*CKTCNS 490
           FFC  I+ + CKTC S
Sbjct: 288 FFCVNIVTSYCKTCIS 303


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 196 VLPKCTILMSRYWA 237
           +L  C I + RYWA
Sbjct: 124 ILNLCAIALDRYWA 137


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 196 VLPKCTILMSRYWA 237
           +L  C I + RYWA
Sbjct: 124 ILNLCAIALDRYWA 137


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 196 VLPKCTILMSRYWA 237
           +L  C I + RYWA
Sbjct: 124 ILNLCAIALDRYWA 137


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 196 VLPKCTILMSRYWA 237
           +L  C I + RYWA
Sbjct: 134 ILNLCVISLDRYWA 147


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,620
Number of Sequences: 438
Number of extensions: 4667
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)