Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt21j04
(625 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton... 38 0.038
CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein. 38 0.038
CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein. 38 0.038
BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting... 38 0.038
BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting... 38 0.038
BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting... 38 0.038
BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting... 38 0.038
BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting... 38 0.038
BC022777-1|AAH22777.1| 422|Homo sapiens acylglycerol kinase pro... 30 7.6
BC014586-1|AAH14586.1| 270|Homo sapiens transmembrane protein 1... 30 7.6
BC004358-1|AAH04358.1| 270|Homo sapiens transmembrane protein 1... 30 7.6
AK222769-1|BAD96489.1| 422|Homo sapiens multi-substrate lipid k... 30 7.6
AK001704-1|BAA91848.1| 422|Homo sapiens protein ( Homo sapiens ... 30 7.6
AJ278150-1|CAB93536.1| 422|Homo sapiens putative lipid kinase p... 30 7.6
>M62762-1|AAA60039.1| 155|Homo sapiens vacuolar H+ ATPase proton
channel subunit protein.
Length = 155
Score = 37.5 bits (83), Expect = 0.038
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 2 LILIFAEVLGLYGLIVAIYL 61
LILIFAEVLGLYGLIVA+ L
Sbjct: 133 LILIFAEVLGLYGLIVALIL 152
>CR541951-1|CAG46749.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 37.5 bits (83), Expect = 0.038
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 2 LILIFAEVLGLYGLIVAIYL 61
LILIFAEVLGLYGLIVA+ L
Sbjct: 133 LILIFAEVLGLYGLIVALIL 152
>CR541930-1|CAG46728.1| 155|Homo sapiens ATP6V0C protein.
Length = 155
Score = 37.5 bits (83), Expect = 0.038
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 2 LILIFAEVLGLYGLIVAIYL 61
LILIFAEVLGLYGLIVA+ L
Sbjct: 133 LILIFAEVLGLYGLIVALIL 152
>BT007155-1|AAP35819.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 37.5 bits (83), Expect = 0.038
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 2 LILIFAEVLGLYGLIVAIYL 61
LILIFAEVLGLYGLIVA+ L
Sbjct: 133 LILIFAEVLGLYGLIVALIL 152
>BC009290-1|AAH09290.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 37.5 bits (83), Expect = 0.038
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 2 LILIFAEVLGLYGLIVAIYL 61
LILIFAEVLGLYGLIVA+ L
Sbjct: 133 LILIFAEVLGLYGLIVALIL 152
>BC007759-1|AAH07759.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 37.5 bits (83), Expect = 0.038
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 2 LILIFAEVLGLYGLIVAIYL 61
LILIFAEVLGLYGLIVA+ L
Sbjct: 133 LILIFAEVLGLYGLIVALIL 152
>BC007389-1|AAH07389.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 37.5 bits (83), Expect = 0.038
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 2 LILIFAEVLGLYGLIVAIYL 61
LILIFAEVLGLYGLIVA+ L
Sbjct: 133 LILIFAEVLGLYGLIVALIL 152
>BC004537-1|AAH04537.1| 155|Homo sapiens ATPase, H+ transporting,
lysosomal 16kDa, V0 subunit c protein.
Length = 155
Score = 37.5 bits (83), Expect = 0.038
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 2 LILIFAEVLGLYGLIVAIYL 61
LILIFAEVLGLYGLIVA+ L
Sbjct: 133 LILIFAEVLGLYGLIVALIL 152
>BC022777-1|AAH22777.1| 422|Homo sapiens acylglycerol kinase
protein.
Length = 422
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 6 FLFSLKYWVFTDLSSPSTCTQNKRPEHTPLPSPVLRASMLII*V*RRAQGWSSP 167
F +LK W T +S S +RP + P +PV R S+ + R A W+ P
Sbjct: 237 FFSTLKEWPQTHQASISYTGPTERPPNEPEETPVQRPSLYRRILRRLASYWAQP 290
>BC014586-1|AAH14586.1| 270|Homo sapiens transmembrane protein 176B
protein.
Length = 270
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 155 MVVAGSGSTLHRVSEHPSTLVYYICSLLVFTYLQTGAA 268
++ AG+G+ +H +HP L YI SLL T T A
Sbjct: 106 VIAAGAGAIVHE--KHPGKLAGYISSLLTLTGFATAMA 141
>BC004358-1|AAH04358.1| 270|Homo sapiens transmembrane protein 176B
protein.
Length = 270
Score = 29.9 bits (64), Expect = 7.6
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +2
Query: 155 MVVAGSGSTLHRVSEHPSTLVYYICSLLVFTYLQTGAA 268
++ AG+G+ +H +HP L YI SLL T T A
Sbjct: 106 VIAAGAGAIVHE--KHPGKLAGYISSLLTLTGFATAMA 141
>AK222769-1|BAD96489.1| 422|Homo sapiens multi-substrate lipid
kinase variant protein.
Length = 422
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 6 FLFSLKYWVFTDLSSPSTCTQNKRPEHTPLPSPVLRASMLII*V*RRAQGWSSP 167
F +LK W T +S S +RP + P +PV R S+ + R A W+ P
Sbjct: 237 FFSTLKEWPQTHQASISYTGPTERPPNEPEETPVQRPSLYRRILRRLASYWAQP 290
>AK001704-1|BAA91848.1| 422|Homo sapiens protein ( Homo sapiens
cDNA FLJ10842 fis, clone NT2RP4001343. ).
Length = 422
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 6 FLFSLKYWVFTDLSSPSTCTQNKRPEHTPLPSPVLRASMLII*V*RRAQGWSSP 167
F +LK W T +S S +RP + P +PV R S+ + R A W+ P
Sbjct: 237 FFSTLKEWPQTHQASISYTGPTERPPNEPEETPVQRPSLYRRILRRLASYWAQP 290
>AJ278150-1|CAB93536.1| 422|Homo sapiens putative lipid kinase
protein.
Length = 422
Score = 29.9 bits (64), Expect = 7.6
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 6 FLFSLKYWVFTDLSSPSTCTQNKRPEHTPLPSPVLRASMLII*V*RRAQGWSSP 167
F +LK W T +S S +RP + P +PV R S+ + R A W+ P
Sbjct: 237 FFSTLKEWPQTHQASISYTGPTERPPNEPEETPVQRPSLYRRILRRLASYWAQP 290
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,551,149
Number of Sequences: 237096
Number of extensions: 1974090
Number of successful extensions: 4416
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4416
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -