Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21i23
         (664 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   1.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.6  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    23   3.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   4.5  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           22   6.0  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           22   6.0  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              21   7.9  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   7.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   7.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   7.9  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    21   7.9  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +3

Query: 111 WSNTTVAPTVTKVLRLPEKLSC 176
           WSN  V  ++ K  RLP  + C
Sbjct: 842 WSNQDVIKSIEKGYRLPAPMDC 863


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +3

Query: 237 GARKRGATTLPTPSSSNATVRDALTSPNSRQ 329
           GA     TT+ T +++  T     T+PN+ Q
Sbjct: 652 GAPATTITTITTTTTTTTTTTTTTTTPNTTQ 682


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 521 IGRELSVMPKGEADACERFVNHCSGYLHPSHY 616
           I R+ ++ P  ++   ERF        HP HY
Sbjct: 403 IHRDSAIYPNPDSFDPERFDQDAMASRHPMHY 434


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -2

Query: 609 DGCR*PLQW 583
           DGCR P QW
Sbjct: 410 DGCRTPFQW 418


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = +2

Query: 545 PKGEADACERFVNHCSGYLHPSHY---YMTDVSLALAQMIG 658
           P  E  A +RF  HC+G +   +    ++ D  L  A +IG
Sbjct: 72  PLNELPANKRFQAHCAGVITALNNVIDFLHDPGLMEASLIG 112


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = +2

Query: 545 PKGEADACERFVNHCSGYLHPSHY---YMTDVSLALAQMIG 658
           P  E  A +RF  HC+G +   +    ++ D  L  A +IG
Sbjct: 72  PLNELPANKRFQAHCAGVITALNNVIDFLHDPGLMEASLIG 112


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +2

Query: 284 ECNCERCSDVTE 319
           EC C +C D+++
Sbjct: 134 ECKCIKCGDISQ 145


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 187 QYQDWRACNSLLHRPLVGHGSAAPPPCRLQVL 282
           +  +W  CN  L  P V   S A  P  L+ L
Sbjct: 619 EINEWERCNLGLEPPRVILSSGAKSPTVLEEL 650


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 187 QYQDWRACNSLLHRPLVGHGSAAPPPCRLQVL 282
           +  +W  CN  L  P V   S A  P  L+ L
Sbjct: 619 EINEWERCNLGLEPPRVILSSGAKSPTVLEEL 650


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +1

Query: 187 QYQDWRACNSLLHRPLVGHGSAAPPPCRLQVL 282
           +  +W  CN  L  P V   S A  P  L+ L
Sbjct: 619 EINEWERCNLGLEPPRVILSSGAKSPTVLEEL 650


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 5/12 (41%), Positives = 9/12 (75%)
 Frame = +2

Query: 284 ECNCERCSDVTE 319
           EC C +C D+++
Sbjct: 134 ECKCIKCGDISQ 145


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 194,690
Number of Sequences: 438
Number of extensions: 4997
Number of successful extensions: 18
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19977660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)