Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt21h09
(1011 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 407 e-114
SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein Ubi2|... 153 4e-38
SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein Ubi1|Schiz... 153 4e-38
SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein Ubi3|Schi... 152 7e-38
SPAC589.10c |||ribomal-ubiquitin fusion protein Ubi5|Schizosacch... 152 7e-38
SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like pro... 92 1e-19
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 44 5e-05
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 42 1e-04
SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase Ubp6|Schizosacc... 41 3e-04
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 29 1.0
SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomy... 27 4.2
SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces po... 27 5.5
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 27 5.5
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 27 5.5
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 407 bits (1003), Expect = e-114
Identities = 202/228 (88%), Positives = 214/228 (93%), Gaps = 2/228 (0%)
Frame = +2
Query: 2 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 181
LVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLED
Sbjct: 69 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 128
Query: 182 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 361
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGI
Sbjct: 129 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGI 188
Query: 362 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEAS 541
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+S
Sbjct: 189 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 248
Query: 542 DTIENVKAKIQDKEGIPPDQQRLIFAGQAA--GRRTHLVRLQHSKRIH 679
DTI+NVK+KIQDKEGIPPDQQRLIFAG+ GR +Q +H
Sbjct: 249 DTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 296
Score = 407 bits (1003), Expect = e-114
Identities = 202/228 (88%), Positives = 214/228 (93%), Gaps = 2/228 (0%)
Frame = +2
Query: 2 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 181
LVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLED
Sbjct: 145 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 204
Query: 182 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 361
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGI
Sbjct: 205 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGI 264
Query: 362 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEAS 541
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+S
Sbjct: 265 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 324
Query: 542 DTIENVKAKIQDKEGIPPDQQRLIFAGQAA--GRRTHLVRLQHSKRIH 679
DTI+NVK+KIQDKEGIPPDQQRLIFAG+ GR +Q +H
Sbjct: 325 DTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 372
Score = 392 bits (965), Expect = e-110
Identities = 194/220 (88%), Positives = 206/220 (93%), Gaps = 2/220 (0%)
Frame = +2
Query: 26 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 206 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 385
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI 120
Query: 386 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 565
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS 180
Query: 566 KIQDKEGIPPDQQRLIFAGQAA--GRRTHLVRLQHSKRIH 679
KIQDKEGIPPDQQRLIFAG+ GR +Q +H
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 220
Score = 317 bits (778), Expect = 2e-87
Identities = 154/161 (95%), Positives = 161/161 (100%)
Frame = +2
Query: 2 LVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 181
LVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLED
Sbjct: 221 LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLED 280
Query: 182 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 361
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGI
Sbjct: 281 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGI 340
Query: 362 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 484
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 341 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
Score = 79.8 bits (188), Expect = 6e-16
Identities = 55/112 (49%), Positives = 64/112 (57%)
Frame = +3
Query: 624 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQNLREKLWTGKDHXFWK*XXXDXIEEREGR 803
KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ + K TGK + D I+ + +
Sbjct: 48 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ-IFVKTLTGKTITL-EVESSDTIDNVKSK 105
Query: 804 XSRTKKEFPXDQQRXXLWLGXXLEXGPPWSXXXXQXXSXPLLVXXXXGXMXI 959
+ K+ P DQQR ++ G LE G S Q S LV G M I
Sbjct: 106 I-QDKEGIPPDQQR-LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 155
Score = 79.8 bits (188), Expect = 6e-16
Identities = 55/112 (49%), Positives = 64/112 (57%)
Frame = +3
Query: 624 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQNLREKLWTGKDHXFWK*XXXDXIEEREGR 803
KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ + K TGK + D I+ + +
Sbjct: 200 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQ-IFVKTLTGKTITL-EVESSDTIDNVKSK 257
Query: 804 XSRTKKEFPXDQQRXXLWLGXXLEXGPPWSXXXXQXXSXPLLVXXXXGXMXI 959
+ K+ P DQQR ++ G LE G S Q S LV G M I
Sbjct: 258 I-QDKEGIPPDQQR-LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 307
Score = 63.7 bits (148), Expect = 4e-11
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 624 KQLEDGRTLSDYNIQKESTLHLVLRLRGGM 713
KQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 352 KQLEDGRTLSDYNIQKESTLHLVLRLRGGL 381
>SPAC1805.12c |uep1|ubi2|ribosomal-ubiquitin fusion protein
Ubi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 4e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 26 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 206 IQKESTLHLVLRLRGG-MQIFVKTLTGK 286
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 4e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 433
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 434 IQKESTLHLVLRLRGG-MQIFVKTLTGK 514
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 95.5 bits (227), Expect = 1e-20
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Frame = +2
Query: 482 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGQAA--GRRTHLVR 655
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAG+ GR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 656 LQHSKRIH 679
+Q +H
Sbjct: 61 IQKESTLH 68
Score = 63.3 bits (147), Expect = 5e-11
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 624 KQLEDGRTLSDYNIQKESTLHLVLRLRGGM 713
KQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 48 KQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77
>SPAC11G7.04 |ubi1||ribosomal-ubiquitin fusion protein
Ubi1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 128
Score = 153 bits (371), Expect = 4e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 26 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 206 IQKESTLHLVLRLRGG-MQIFVKTLTGK 286
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 153 bits (371), Expect = 4e-38
Identities = 76/88 (86%), Positives = 82/88 (93%), Gaps = 1/88 (1%)
Frame = +2
Query: 254 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 433
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 434 IQKESTLHLVLRLRGG-MQIFVKTLTGK 514
IQKESTLHLVLRLRGG ++ +K L K
Sbjct: 61 IQKESTLHLVLRLRGGIIEPSLKALASK 88
Score = 95.5 bits (227), Expect = 1e-20
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Frame = +2
Query: 482 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGQAA--GRRTHLVR 655
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAG+ GR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 656 LQHSKRIH 679
+Q +H
Sbjct: 61 IQKESTLH 68
Score = 63.3 bits (147), Expect = 5e-11
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +3
Query: 624 KQLEDGRTLSDYNIQKESTLHLVLRLRGGM 713
KQLEDGRTLSDYNIQKESTLHLVLRLRGG+
Sbjct: 48 KQLEDGRTLSDYNIQKESTLHLVLRLRGGI 77
>SPAC6G10.11c |ubi3||ribosomal ubiquitin fusion protein
Ubi3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 7e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 26 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 206 IQKESTLHLVLRLRGG 253
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 7e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 254 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 433
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 434 IQKESTLHLVLRLRGG 481
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 95.5 bits (227), Expect = 1e-20
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Frame = +2
Query: 482 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGQAA--GRRTHLVR 655
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAG+ GR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 656 LQHSKRIH 679
+Q +H
Sbjct: 61 IQKESTLH 68
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +3
Query: 624 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQNLREKLWT 740
KQLEDGRTLSDYNIQKESTLHLVLRLRGG + ++K +T
Sbjct: 48 KQLEDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKKTYT 86
>SPAC589.10c |||ribomal-ubiquitin fusion protein
Ubi5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 150
Score = 152 bits (369), Expect = 7e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 26 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 206 IQKESTLHLVLRLRGG 253
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 152 bits (369), Expect = 7e-38
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +2
Query: 254 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 433
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 434 IQKESTLHLVLRLRGG 481
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 95.5 bits (227), Expect = 1e-20
Identities = 48/68 (70%), Positives = 54/68 (79%), Gaps = 2/68 (2%)
Frame = +2
Query: 482 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGQAA--GRRTHLVR 655
MQIFVKTLTGKTITLEVE+SDTI+NVK+KIQDKEGIPPDQQRLIFAG+ GR
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 656 LQHSKRIH 679
+Q +H
Sbjct: 61 IQKESTLH 68
Score = 66.9 bits (156), Expect = 4e-12
Identities = 31/39 (79%), Positives = 35/39 (89%)
Frame = +3
Query: 624 KQLEDGRTLSDYNIQKESTLHLVLRLRGGMQNLREKLWT 740
KQLEDGRTLSDYNIQKESTLHLVLRLRGG + ++K +T
Sbjct: 48 KQLEDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKKTYT 86
>SPBC12D12.08c |ned8|nedd8, ubl1, SPBC24C6.01c|ubiquitin-like
protein modifier Ned8|Schizosaccharomyces pombe|chr
2|||Manual
Length = 78
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +2
Query: 26 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 206 IQKESTLHLVLRLRGG 253
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 91.9 bits (218), Expect = 1e-19
Identities = 40/76 (52%), Positives = 56/76 (73%)
Frame = +2
Query: 254 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 433
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AGKQ+ D + Y+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYH 60
Query: 434 IQKESTLHLVLRLRGG 481
++ S LHLVL LRGG
Sbjct: 61 LEGGSVLHLVLALRGG 76
Score = 62.9 bits (146), Expect = 7e-11
Identities = 26/48 (54%), Positives = 38/48 (79%)
Frame = +2
Query: 482 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGQ 625
M I VKTLTGK I L+++ +D + +K ++++KEGIPP QQRLI+AG+
Sbjct: 1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGK 48
Score = 33.5 bits (73), Expect = 0.048
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +3
Query: 624 KQLEDGRTLSDYNIQKESTLHLVLRLRGG 710
KQ+ D + Y+++ S LHLVL LRGG
Sbjct: 48 KQMADDKNAESYHLEGGSVLHLVLALRGG 76
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 43.6 bits (98), Expect = 5e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +2
Query: 56 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 217
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
Score = 43.6 bits (98), Expect = 5e-05
Identities = 18/54 (33%), Positives = 35/54 (64%)
Frame = +2
Query: 284 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 445
K + +V A I +K KIQ ++ ++Q+LI++G+ L D +T+ +YNI+++
Sbjct: 12 KFVISDVSADTKISELKEKIQTQQNYEVERQKLIYSGRILADDKTVGEYNIKEQ 65
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 26 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 205
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 206 IQKESTLHLVLRL 244
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
Score = 42.3 bits (95), Expect = 1e-04
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 254 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 433
+ + +K + + V++ ++ +K I I ++QRLI+AG+ L+D +L Y
Sbjct: 4 ISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLIYAGRVLKDEESLKTYK 63
Query: 434 IQKESTLHLVLRL 472
IQ ++HLV L
Sbjct: 64 IQDGHSIHLVKTL 76
>SPAC6G9.08 |ubp6||ubiquitin C-terminal hydrolase
Ubp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 467
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 53 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 226
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/58 (32%), Positives = 33/58 (56%)
Frame = +2
Query: 281 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 454
GK LE+E ++T +K ++ +PP++Q++I G QL+D L I+ +TL
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKGGQLKDDVLLGSVGIKPNATL 67
Score = 30.3 bits (65), Expect = 0.45
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +2
Query: 509 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 622
GK LE+E ++T +K ++ +PP++Q++I G
Sbjct: 10 GKKYDLEIEPNETGSTLKHQLYSLTQVPPERQKVIVKG 47
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 29.1 bits (62), Expect = 1.0
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +1
Query: 175 GRRTHLVRLQHSKRIHSPSCTASSWRHADLRENSDRKDHHFGSRSFGH 318
G R V L ++H P + A+ +EN HHF R F +
Sbjct: 143 GNRKIRVLLDQGNQMHRPVAPETKAEEAEHQENEKHHRHHFRLRKFAN 190
>SPBC1E8.02 |||ubiquitin family protein, unknown|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 603
Score = 27.1 bits (57), Expect = 4.2
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +2
Query: 29 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 202
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 203 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 292
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
Score = 27.1 bits (57), Expect = 4.2
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 QIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD--Y 430
+I V T+ K +V + T+ +K I P D+ +LI AG+ L + L + +
Sbjct: 5 RIRVTTVDQKVGIFQVPRTKTVLELKELIAVTFEAPADRLKLIHAGRVLRNETPLEEILH 64
Query: 431 NIQKESTLHLVLRLRGGMQIFVKTLTGKTI 520
+ T HLV+ + + + T ++
Sbjct: 65 DATDLVTFHLVIAVFNSTSTTLPSATSSSV 94
>SPACUNK4.10 |||hydroxyacid dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 334
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -2
Query: 707 STKTQYKMECGFFLNV 660
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
Score = 26.6 bits (56), Expect = 5.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 478 STKTQYKMECGFFLNV 431
S +TQYKMEC +NV
Sbjct: 298 SLETQYKMECAVLMNV 313
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 26.6 bits (56), Expect = 5.5
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 415 HLVRLQHSKRIHTPSCIASSWRHADLRKNSDR*D-HHFGSRSFGHNRECEGEDPRQRRNS 591
H + + HS + SS+ H +KNS R H + S G+N + E +Q S
Sbjct: 108 HAITIHHSTG---NGLLRSSFDHDYRQKNSPRNSIHRLSNISIGNN-PIDFESSQQNNPS 163
Query: 592 S*STASH 612
S +T+SH
Sbjct: 164 SLNTSSH 170
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 26.6 bits (56), Expect = 5.5
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 636 DGRTLSDYNIQKESTLHLVLRLRGGMQNLR 725
DG TL++ N HL++RL+ Q L+
Sbjct: 432 DGETLNEINTNNPEREHLIVRLKVDSQKLK 461
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,011,076
Number of Sequences: 5004
Number of extensions: 84631
Number of successful extensions: 293
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 525259918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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