Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21g21
         (542 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   1.5  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   2.0  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.7  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   2.7  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   2.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   4.6  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   4.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   4.6  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   6.1  

>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 15/65 (23%), Positives = 32/65 (49%)
 Frame = +1

Query: 298 LQGSLTDSECTDLRLNRTEEAFQELNKKSAALKKILSRIPDEITDRKTFLETIKEIASAI 477
           L+ +LT  E   L   R +EA +   + + + KK+L     +  DR+    +  ++ + +
Sbjct: 260 LRWNLTSGERVGLVGGRVKEALRIARQMTTSRKKVLPYYWYKYQDRRDTDLSRADLEATL 319

Query: 478 KKLLD 492
           +K+ D
Sbjct: 320 RKITD 324


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 445 LETIKEIASAIKKLLDAVNEVS 510
           L T+ E A  +KK L ++NE S
Sbjct: 867 LSTLVEFALELKKALSSINEQS 888


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = +1

Query: 337 RLNRTEEAFQELNKKSAALKK 399
           +LN+  +A+++LN++  AL K
Sbjct: 75  KLNKIHDAYKDLNQRYGALCK 95


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 120 SFNSPCPNAAGEI*SGCLSDITSSS 194
           +F+   PN+ G   +GC S++ S+S
Sbjct: 62  NFSPSGPNSPGSFTAGCHSNLLSTS 86


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 120 SFNSPCPNAAGEI*SGCLSDITSSS 194
           +F+   PN+ G   +GC S++ S+S
Sbjct: 62  NFSPSGPNSPGSFTAGCHSNLLSTS 86


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = -1

Query: 320 ESVRLPCNLNKLSFILTGI-SALLMIPAT 237
           + V L CN+  +SF+ + + +ALL++ +T
Sbjct: 661 KQVILKCNIQDMSFLFSQLYNALLILIST 689


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 133 PVLTQLEKYDLAASQTLRAALTKAEAAV 216
           P+L +LEK  L++S T  + +T  ++ +
Sbjct: 313 PMLQKLEKPVLSSSTTTTSPMTSTKSTI 340


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = -1

Query: 320 ESVRLPCNLNKLSFILTGI-SALLMIPAT 237
           + V L CN+  +SF+ + + +ALL++ +T
Sbjct: 751 KQVILKCNIQDMSFLFSQLYNALLILIST 779


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = +1

Query: 94  LPVTSLVLPVLIRPVL 141
           LP TSLVLP++ + +L
Sbjct: 286 LPPTSLVLPLIAKYLL 301


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,940
Number of Sequences: 438
Number of extensions: 2759
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)