Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21g08
         (705 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    23   3.7  
AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor prot...    23   3.7  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   4.9  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.5  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    21   8.6  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   8.6  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   8.6  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = -1

Query: 438 IPHCPGCCQPASVAIHDLWAAY 373
           +P CP CC    +     W  Y
Sbjct: 350 VPFCPDCCPSDRMVYFITWLGY 371


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = -1

Query: 438 IPHCPGCCQPASVAIHDLWAAY 373
           +P CP CC    +     W  Y
Sbjct: 350 VPFCPDCCPSDRMVYFITWLGY 371


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = -1

Query: 438 IPHCPGCCQPASVAIHDLWAAY 373
           +P CP CC    +     W  Y
Sbjct: 350 VPFCPDCCPSDRMVYFITWLGY 371


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 599 NFEIDSFDGRNVRESRLVKC 540
           N EID +  R  +E RL KC
Sbjct: 228 NCEIDMYMRRKCQECRLKKC 247


>AB095514-1|BAC76336.1|   72|Apis mellifera ecdyson receptor
           protein.
          Length = 72

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 599 NFEIDSFDGRNVRESRLVKC 540
           N EID +  R  +E RL KC
Sbjct: 25  NCEIDMYMRRKCQECRLKKC 44


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 4.9
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 170 GPRYGRHRSGQDP 132
           GPR GR+ +G DP
Sbjct: 203 GPRLGRYDNGIDP 215


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 232 TCNKAAGAFGITSGTTW 182
           + NKA+ AFGI S T +
Sbjct: 483 SANKASKAFGIPSSTLY 499


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 14/65 (21%), Positives = 27/65 (41%)
 Frame = -2

Query: 449 FAGAYLIALDVANQPVLQFTIYGQLTGRHVRVDHGQSVVLPWLRVPFH*RLVFHLSWSQL 270
           +  AY+  +       LQF ++  L  R++      S + P+L   +  + V  L W+  
Sbjct: 42  YTKAYIYTIKSNMAKTLQFDVHMMLQFRYLDARLKFSNIAPYLNQIYGGQFVRDLIWTPT 101

Query: 269 IAFFN 255
           +   N
Sbjct: 102 VYVSN 106


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +3

Query: 645 NFFVAQFDVPILNN 686
           NFF+  FD+  L N
Sbjct: 381 NFFITMFDLDFLTN 394


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.4 bits (43), Expect = 8.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = +3

Query: 297 EPSVKWDAEPGQYYTLAMVDPDVPSRKLP 383
           +PS+     PG +Y  A    D+P  + P
Sbjct: 53  DPSLLRQGVPGHHYGAAGSQQDMPYPRFP 81


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,121
Number of Sequences: 438
Number of extensions: 4700
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21683070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)