Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21g04
         (487 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC023588-1|AAH23588.1|  164|Homo sapiens ribonuclease H2, subuni...    50   4e-06
AK024627-1|BAB14937.1|  163|Homo sapiens protein ( Homo sapiens ...    50   4e-06
AF346606-1|AAO49177.1|  164|Homo sapiens AYP1 protein.                 50   4e-06
AF346605-1|AAO49176.1|  164|Homo sapiens AYP1 protein.                 50   4e-06
AF312034-1|AAL87739.1|  164|Homo sapiens RNase H1 small subunit ...    50   4e-06
AJ012737-1|CAB46442.1| 2692|Homo sapiens filamin, muscle isoform...    31   2.8  
AF252549-1|AAF67190.1| 2725|Homo sapiens gamma-filamin protein.        31   2.8  
AF184126-1|AAF68195.1| 2705|Homo sapiens filamin 2 protein.            31   2.8  
AF146692-1|AAF80245.1| 2691|Homo sapiens filamin 2 protein.            31   2.8  
AF089841-1|AAD12245.1| 2705|Homo sapiens gamma-filamin protein.        31   2.8  

>BC023588-1|AAH23588.1|  164|Homo sapiens ribonuclease H2, subunit C
           protein.
          Length = 164

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 21/128 (16%)
 Frame = +3

Query: 102 IPCKIEQDGSANVKKYFDPYIXENNSQELSATFRGHPLDGTQIXFPEGYRA-VLXTETKR 278
           +PC++  DG A V ++F P I +   + L  +FRG  L G ++  P G    V+ TE K+
Sbjct: 32  LPCEVAVDGPAPVGRFFTPAIRQ-GPEGLEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKK 90

Query: 279 --------------------PLTEDAERKFQVTGGFKNFTXWNWDKKPSKNDDLCXAMDW 398
                               PL  D +R    T  F  FT W  +  P  +  +  A+ W
Sbjct: 91  VSMGKPDPLRDSGTDDQEEEPLERDFDRFIGATANFSRFTLWGLETIPGPDAKVRGALTW 150

Query: 399 IEIAEXIH 422
             +A  IH
Sbjct: 151 PSLAAAIH 158


>AK024627-1|BAB14937.1|  163|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ20974 fis, clone ADSU01596. ).
          Length = 163

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 36/127 (28%), Positives = 53/127 (41%), Gaps = 20/127 (15%)
 Frame = +3

Query: 102 IPCKIEQDGSANVKKYFDPYIXENNSQELSATFRGHPLDGTQIXFPEGYRA-VLXTETK- 275
           +PC++  DG A V ++F P I +   + L  +FRG  L G ++  P G    V+ TE K 
Sbjct: 32  LPCEVAVDGPAPVGRFFTPAIRQ-GPEGLEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKV 90

Query: 276 ------------------RPLTEDAERKFQVTGGFKNFTXWNWDKKPSKNDDLCXAMDWI 401
                              PL  D +R    T  F  FT W  +  P  +  +  A+ W 
Sbjct: 91  SMGKPDPLRDSGTDDQEEEPLERDFDRFIGATANFSRFTLWGLETIPGPDAKVRGALTWP 150

Query: 402 EIAEXIH 422
            +A  IH
Sbjct: 151 SLAAAIH 157


>AF346606-1|AAO49177.1|  164|Homo sapiens AYP1 protein.
          Length = 164

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 21/128 (16%)
 Frame = +3

Query: 102 IPCKIEQDGSANVKKYFDPYIXENNSQELSATFRGHPLDGTQIXFPEGYRA-VLXTETKR 278
           +PC++  DG A V ++F P I +   + L  +FRG  L G ++  P G    V+ TE K+
Sbjct: 32  LPCEVAVDGPAPVGRFFTPAIRQ-GPEGLEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKK 90

Query: 279 --------------------PLTEDAERKFQVTGGFKNFTXWNWDKKPSKNDDLCXAMDW 398
                               PL  D +R    T  F  FT W  +  P  +  +  A+ W
Sbjct: 91  VSMGKPDPLRDSGTDDQEEEPLERDFDRFIGATANFSRFTLWGLETIPGPDAKVRGALTW 150

Query: 399 IEIAEXIH 422
             +A  IH
Sbjct: 151 PSLAAAIH 158


>AF346605-1|AAO49176.1|  164|Homo sapiens AYP1 protein.
          Length = 164

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 21/128 (16%)
 Frame = +3

Query: 102 IPCKIEQDGSANVKKYFDPYIXENNSQELSATFRGHPLDGTQIXFPEGYRA-VLXTETKR 278
           +PC++  DG A V ++F P I +   + L  +FRG  L G ++  P G    V+ TE K+
Sbjct: 32  LPCEVAVDGPAPVGRFFTPAIRQ-GPEGLEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKK 90

Query: 279 --------------------PLTEDAERKFQVTGGFKNFTXWNWDKKPSKNDDLCXAMDW 398
                               PL  D +R    T  F  FT W  +  P  +  +  A+ W
Sbjct: 91  VSMGKPDPLRDSGTDDQEEEPLERDFDRFIGATANFSRFTLWGLETIPGPDAKVRGALTW 150

Query: 399 IEIAEXIH 422
             +A  IH
Sbjct: 151 PSLAAAIH 158


>AF312034-1|AAL87739.1|  164|Homo sapiens RNase H1 small subunit
           protein.
          Length = 164

 Score = 50.0 bits (114), Expect = 4e-06
 Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 21/128 (16%)
 Frame = +3

Query: 102 IPCKIEQDGSANVKKYFDPYIXENNSQELSATFRGHPLDGTQIXFPEGYRA-VLXTETKR 278
           +PC++  DG A V ++F P I +   + L  +FRG  L G ++  P G    V+ TE K+
Sbjct: 32  LPCEVAVDGPAPVGRFFTPAIRQ-GPEGLEVSFRGRCLRGEEVAVPPGLVGYVMVTEEKK 90

Query: 279 --------------------PLTEDAERKFQVTGGFKNFTXWNWDKKPSKNDDLCXAMDW 398
                               PL  D +R    T  F  FT W  +  P  +  +  A+ W
Sbjct: 91  VSMGKPDPLRDSGTDDQEEEPLERDFDRFIGATANFSRFTLWGLETIPGPDAKVRGALTW 150

Query: 399 IEIAEXIH 422
             +A  IH
Sbjct: 151 PSLAAAIH 158


>AJ012737-1|CAB46442.1| 2692|Homo sapiens filamin, muscle isoform
            protein.
          Length = 2692

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 102  IPCKIEQDGSANVK--KYFDPYIXENNSQELSATFRGHPLDGT 224
            IPCK+E  G A  +  +Y  P   E    ++  T+ GHP+ G+
Sbjct: 1011 IPCKLEPGGGAEAQAVRYMPP---EEGPYKVDITYDGHPVPGS 1050


>AF252549-1|AAF67190.1| 2725|Homo sapiens gamma-filamin protein.
          Length = 2725

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 102  IPCKIEQDGSANVK--KYFDPYIXENNSQELSATFRGHPLDGT 224
            IPCK+E  G A  +  +Y  P   E    ++  T+ GHP+ G+
Sbjct: 1011 IPCKLEPGGGAEAQAVRYMPP---EEGPYKVDITYDGHPVPGS 1050


>AF184126-1|AAF68195.1| 2705|Homo sapiens filamin 2 protein.
          Length = 2705

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 102  IPCKIEQDGSANVK--KYFDPYIXENNSQELSATFRGHPLDGT 224
            IPCK+E  G A  +  +Y  P   E    ++  T+ GHP+ G+
Sbjct: 991  IPCKLEPGGGAEAQAVRYMPP---EEGPYKVDITYDGHPVPGS 1030


>AF146692-1|AAF80245.1| 2691|Homo sapiens filamin 2 protein.
          Length = 2691

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 102  IPCKIEQDGSANVK--KYFDPYIXENNSQELSATFRGHPLDGT 224
            IPCK+E  G A  +  +Y  P   E    ++  T+ GHP+ G+
Sbjct: 1011 IPCKLEPGGGAEAQAVRYMPP---EEGPYKVDITYDGHPVPGS 1050


>AF089841-1|AAD12245.1| 2705|Homo sapiens gamma-filamin protein.
          Length = 2705

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = +3

Query: 102  IPCKIEQDGSANVK--KYFDPYIXENNSQELSATFRGHPLDGT 224
            IPCK+E  G A  +  +Y  P   E    ++  T+ GHP+ G+
Sbjct: 991  IPCKLEPGGGAEAQAVRYMPP---EEGPYKVDITYDGHPVPGS 1030


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,695,785
Number of Sequences: 237096
Number of extensions: 832744
Number of successful extensions: 1554
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1549
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)