Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt21g03
(546 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 24 1.2
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 1.5
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 3.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 4.7
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 21 6.2
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 6.2
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 6.2
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 6.2
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 6.2
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 6.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 6.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 6.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 6.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 6.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 6.2
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 6.2
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 6.2
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 21 8.2
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 23.8 bits (49), Expect = 1.2
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2
Query: 59 EGHSCIVINRPVFNNTFFLLSVPGDIRRK 145
EG SC+VI+R FN L+S +IR +
Sbjct: 310 EGVSCLVIDRETFNQ---LISSLDEIRTR 335
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.4 bits (48), Expect = 1.5
Identities = 10/42 (23%), Positives = 21/42 (50%)
Frame = -1
Query: 162 WPF*KHFLRISPGTLNKKKVLLKTGLLITIQECPSYNTINSY 37
+PF KH L P ++ +K G + + +Y +++S+
Sbjct: 887 FPFDKHILDKLPTLISNYIEAVKEGKFMNVNMLDTYESVHSF 928
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 22.2 bits (45), Expect = 3.5
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 420 NYYITKYNKFNEQWP 376
NYY Y K++ Q+P
Sbjct: 716 NYYANLYTKYHGQYP 730
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.8 bits (44), Expect = 4.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 232 SVEYKL*KSLSNSYDSLNKVQNYSFS 309
S E K+ SLSN+Y+ N Y+++
Sbjct: 309 SKERKIISSLSNNYNYNNNNYKYNYN 334
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.4 bits (43), Expect = 6.2
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -1
Query: 129 PGTLNKKKVLLKTGLLITIQECPSYNTINSYCPIPK 22
P TLN V + +I+ S N+ +S P P+
Sbjct: 387 PSTLNIPSVKIDEDQKCSIESITSVNSTSSPKPFPR 422
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 232 SVEYKL*KSLSNSYDSLNKVQNY 300
S E K+ SLSN+Y+ N NY
Sbjct: 76 SKEPKIISSLSNNYNYNNYNNNY 98
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 232 SVEYKL*KSLSNSYDSLNKVQNY 300
S E K+ SLSN+Y+ N NY
Sbjct: 76 SKEPKIISSLSNNYNYNNYNNNY 98
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 232 SVEYKL*KSLSNSYDSLNKVQNY 300
S E K+ SLSN+Y+ N NY
Sbjct: 76 SKEPKIISSLSNNYNYNNYNNNY 98
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 6.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 232 SVEYKL*KSLSNSYDSLNKVQNY 300
S E K+ SLSN+Y+ N NY
Sbjct: 76 SKEPKIISSLSNNYNYNNYNNNY 98
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 6.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 232 SVEYKL*KSLSNSYDSLNKVQNY 300
S E K+ SLSN+Y+ N NY
Sbjct: 309 SKEPKIISSLSNNYNYNNYNNNY 331
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 232 SVEYKL*KSLSNSYDSLNKVQNY 300
S E K+ SLSN+Y+ N NY
Sbjct: 309 SKEPKIISSLSNNYNYNNYNNNY 331
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 232 SVEYKL*KSLSNSYDSLNKVQNY 300
S E K+ SLSN+Y+ N NY
Sbjct: 309 SKEPKIISSLSNNYNYNNYNNNY 331
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 232 SVEYKL*KSLSNSYDSLNKVQNY 300
S E K+ SLSN+Y+ N NY
Sbjct: 309 SKEPKIISSLSNNYNYNNYNNNY 331
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 6.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 232 SVEYKL*KSLSNSYDSLNKVQNY 300
S E K+ SLSN+Y+ N NY
Sbjct: 309 SKEPKIISSLSNNYNYNNYNNNY 331
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 6.2
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 232 SVEYKL*KSLSNSYDSLNKVQNY 300
S E K+ SLSN+Y+ N NY
Sbjct: 298 SKEPKIISSLSNNYNYNNYNNNY 320
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 6.2
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = -1
Query: 516 YYELPNLKHIKQPDI-TNYTTLVPCSLNHRHKLNYYITKYNKFNEQ--WPTIF*IIINMC 346
YY PNL + P++ + T + S + YNKFN + +N C
Sbjct: 265 YYVTPNLSKLSDPEVWIDAVTQIFFSYALGLGALVALGSYNKFNNNVYKDALIVCTVNSC 324
Query: 345 YTIVLSLV 322
+++ +V
Sbjct: 325 TSMLSGIV 332
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 6.2
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
Frame = -1
Query: 516 YYELPNLKHIKQPDI-TNYTTLVPCSLNHRHKLNYYITKYNKFNEQ--WPTIF*IIINMC 346
YY PNL + P++ + T + S + YNKFN + +N C
Sbjct: 318 YYVTPNLSKLSDPEVWIDAVTQIFFSYALGLGALVALGSYNKFNNNVYKDALIVCTVNSC 377
Query: 345 YTIVLSLV 322
+++ +V
Sbjct: 378 TSMLSGIV 385
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 21.0 bits (42), Expect = 8.2
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -1
Query: 474 ITNYTTLVPCSLNHRH 427
+TNY+ + C+L H
Sbjct: 72 LTNYSCFITCALEKSH 87
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,569
Number of Sequences: 438
Number of extensions: 3042
Number of successful extensions: 30
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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