Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21e21
         (200 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical ...    31   0.085
Z68001-2|CAA91973.2|  130|Caenorhabditis elegans Hypothetical pr...    29   0.60 
U88184-4|AAK31518.1|   96|Caenorhabditis elegans Hypothetical pr...    27   1.4  
AL021447-4|CAB60285.3|  330|Caenorhabditis elegans Hypothetical ...    27   1.8  
AF000197-3|AAB52898.2|  109|Caenorhabditis elegans Hypothetical ...    27   1.8  
Z68215-1|CAA92450.1|  517|Caenorhabditis elegans Hypothetical pr...    26   3.2  
Z32681-5|CAA83606.1|  341|Caenorhabditis elegans Hypothetical pr...    26   4.2  
AC006777-6|AAK72307.1|  517|Caenorhabditis elegans Hypothetical ...    26   4.2  
AF039052-12|AAF98633.1|  391|Caenorhabditis elegans Hypothetical...    25   5.6  
Z82073-3|CAB04926.1|  631|Caenorhabditis elegans Hypothetical pr...    25   7.4  
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting...    25   7.4  
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting...    25   7.4  
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting...    25   7.4  
AF022973-4|AAC25798.1|  314|Caenorhabditis elegans Temporarily a...    25   7.4  
Z30662-5|CAA83134.1|  363|Caenorhabditis elegans Hypothetical pr...    25   9.8  

>AC084152-2|AAM69073.2| 1571|Caenorhabditis elegans Hypothetical
           protein Y102A11A.3 protein.
          Length = 1571

 Score = 31.5 bits (68), Expect = 0.085
 Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 4/44 (9%)
 Frame = -3

Query: 144 LKEINAKIIINTHEMNQHKIYIN-LENIYHVEYKN---ISINYN 25
           LK +N+K++INT  + ++ + IN +++ YH   +N    SIN N
Sbjct: 807 LKTVNSKVLINTEFLQENSLTINVIDSCYHENIQNHVLSSINNN 850


>Z68001-2|CAA91973.2|  130|Caenorhabditis elegans Hypothetical
          protein C11G10.1 protein.
          Length = 130

 Score = 28.7 bits (61), Expect = 0.60
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 3  IISFFSAGYSLYLYSYIQHGKY 68
          +I+ FSAG +L + SY+ HG Y
Sbjct: 22 LIAVFSAGLTLLIASYMYHGSY 43


>U88184-4|AAK31518.1|   96|Caenorhabditis elegans Hypothetical
           protein F36H5.9 protein.
          Length = 96

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
 Frame = -3

Query: 153 LSYLKEINAKIIINTHEMNQHKIYINLENIYHV--EYKNISINYN 25
           LS L E N+K +I+  ++   KIYI ++N  HV  +  N S  +N
Sbjct: 29  LSLLSE-NSKKLISALKIFDRKIYIEVQNHVHVILDTHNCSFGFN 72


>AL021447-4|CAB60285.3|  330|Caenorhabditis elegans Hypothetical
           protein F19B2.8 protein.
          Length = 330

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 11/41 (26%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +1

Query: 7   FLFLVLVIVYTYIL-IFNMVNI-FKVYIDFMLVHLVSIYYY 123
           FLF++ +++Y+ +L I   + I F++ +  + +    IY+Y
Sbjct: 110 FLFIICILIYSQVLTILTYLTITFQLLVSLLAISKFLIYFY 150


>AF000197-3|AAB52898.2|  109|Caenorhabditis elegans Hypothetical
           protein T21G5.2 protein.
          Length = 109

 Score = 27.1 bits (57), Expect = 1.8
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +1

Query: 7   FLFLVLVIVYTYILIFNMVNIFKVYIDFMLVHLVSIYYYF 126
           F+FL+  +++TYI IF+ + +   Y  F+ + + ++   F
Sbjct: 30  FIFLIQFVIFTYIHIFSYLCVLFNYFLFIDLSISTVIVSF 69


>Z68215-1|CAA92450.1|  517|Caenorhabditis elegans Hypothetical
           protein C53B4.1 protein.
          Length = 517

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +1

Query: 10  LFLVLVIVYTYILIFNMVNIFKVYIDFM 93
           L + ++++Y   LIF+   IF +++DFM
Sbjct: 22  LDITVMVLYQITLIFSAQLIFVIFLDFM 49


>Z32681-5|CAA83606.1|  341|Caenorhabditis elegans Hypothetical
           protein F56F3.4 protein.
          Length = 341

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -2

Query: 181 QIEIKSTFKIIIFKGNQCKNNNKYSRD 101
           + E+ +  ++++FKG + K+NNK   D
Sbjct: 54  ETEVLTNRQVLLFKGMELKDNNKTMTD 80


>AC006777-6|AAK72307.1|  517|Caenorhabditis elegans Hypothetical
           protein Y46H3D.4 protein.
          Length = 517

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = -3

Query: 198 FFLFKIK*K*NQPLKLSYLKEI-NAKIIINTHEMNQH--KIYINLENIYHVEYKNISIN 31
           FF+F        P+ LS L +I N    +N +  + H    +  LENI   +Y N+ IN
Sbjct: 197 FFMFFNVYTTQPPIDLSPLSDIQNISGCLNFYSTDLHDFSFFEKLENIKSNKYANVDIN 255


>AF039052-12|AAF98633.1|  391|Caenorhabditis elegans Hypothetical
           protein T22D1.12 protein.
          Length = 391

 Score = 25.4 bits (53), Expect = 5.6
 Identities = 11/40 (27%), Positives = 21/40 (52%)
 Frame = +1

Query: 10  LFLVLVIVYTYILIFNMVNIFKVYIDFMLVHLVSIYYYFC 129
           L L+ ++V TY + +  +NI+ V     +++     Y FC
Sbjct: 272 LLLLFLLVLTYAVCWAPMNIYHVLNGLEIINYSQNMYIFC 311


>Z82073-3|CAB04926.1|  631|Caenorhabditis elegans Hypothetical
           protein W06D12.5 protein.
          Length = 631

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 19  VLVIVYTYILIFNMVNIFKVYIDFMLVHLVSIY 117
           VLV VY +I +   + + +    F LVHL  +Y
Sbjct: 344 VLVCVYGFIFVPVTLVVLRDLGQFFLVHLTKLY 376


>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
           protein protein8, isoform a protein.
          Length = 1132

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 30  SLYLYSYIQHGKYFQGLYRFYVGSSREYLLLFLH 131
           SL+      H K F GL  F+V  +   L+LF +
Sbjct: 224 SLFKSRQADHVKIFHGLTEFFVDKTASDLVLFYY 257


>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
           protein protein8, isoform b protein.
          Length = 1780

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 30  SLYLYSYIQHGKYFQGLYRFYVGSSREYLLLFLH 131
           SL+      H K F GL  F+V  +   L+LF +
Sbjct: 224 SLFKSRQADHVKIFHGLTEFFVDKTASDLVLFYY 257


>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
           protein protein8, isoform c protein.
          Length = 1697

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +3

Query: 30  SLYLYSYIQHGKYFQGLYRFYVGSSREYLLLFLH 131
           SL+      H K F GL  F+V  +   L+LF +
Sbjct: 224 SLFKSRQADHVKIFHGLTEFFVDKTASDLVLFYY 257


>AF022973-4|AAC25798.1|  314|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 57 protein.
          Length = 314

 Score = 25.0 bits (52), Expect = 7.4
 Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 4/36 (11%)
 Frame = +1

Query: 10  LFLVLVIVYTYILIFNMV----NIFKVYIDFMLVHL 105
           L +++VI YT   +++++    NIF VYI +  + L
Sbjct: 12  LIMIIVIAYTLQFLYHLIKISLNIFGVYIFYTPIDL 47


>Z30662-5|CAA83134.1|  363|Caenorhabditis elegans Hypothetical
           protein T16H12.8 protein.
          Length = 363

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 28  IVYTYILIFNMVNIFKVYIDFMLVHLVSI 114
           +++ +I  F+M N  KVY   + + L+ I
Sbjct: 86  VIWVFITKFSMTNALKVYRIMVFIGLIEI 114


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,836,171
Number of Sequences: 27780
Number of extensions: 63777
Number of successful extensions: 261
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 12,740,198
effective HSP length: 46
effective length of database: 11,462,318
effective search space used: 229246360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)