Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21e10
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75955-3|CAB00114.1|  461|Caenorhabditis elegans Hypothetical pr...   113   1e-25
Z75955-13|CAB00113.2|  424|Caenorhabditis elegans Hypothetical p...    69   2e-12
AF016676-2|AAG24106.1|  500|Caenorhabditis elegans Cytochrome p4...    29   4.1  
U41746-3|AAO25990.1|  429|Caenorhabditis elegans Aspartyl protea...    28   7.2  
U41746-2|AAO25989.1|  635|Caenorhabditis elegans Aspartyl protea...    28   7.2  
U97403-9|AAB52469.1|  389|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AF003384-6|AAB54238.2|  451|Caenorhabditis elegans Coenzyme q (u...    27   9.6  

>Z75955-3|CAB00114.1|  461|Caenorhabditis elegans Hypothetical
           protein R07B7.5 protein.
          Length = 461

 Score =  113 bits (272), Expect = 1e-25
 Identities = 69/173 (39%), Positives = 102/173 (58%), Gaps = 15/173 (8%)
 Frame = +3

Query: 213 SLEALFLAKRGHRVRLYEYREDIRNTPQARGRSINLALSIRGRTALREVGLEDHMINNHG 392
           +L A F A++G  V +YE+R+DIR     +GRSINLALS RG++AL  VGL+++++ N G
Sbjct: 14  ALNACFFAQKGWDVSVYEFRKDIRTMKHVQGRSINLALSQRGKSALEAVGLKEYIV-NQG 72

Query: 393 IPMKGRNIHRIDGSTYIIPYDSRTKQCIYSVGRNYLNGLLLQESEKYENVERFFNHKLIA 572
           +P+  R IH  DG TY      +  + I S+ R +LN +++ ++EK  NV+ FF HK+  
Sbjct: 73  VPLYARLIHNKDGKTYSRQPYGKPGEHIVSINRRHLNEVMITQAEKSPNVKFFFEHKVKN 132

Query: 573 SNLRKGFLSFQ-------------KTDTKEIVE--VNADLIIGADGAFSAVRK 686
            +  K  L  Q             K+  +E  E  V ADLI+  DGA+SAVR+
Sbjct: 133 VDYDKKQLVVQCTSQPSKIPTFGNKSPPQEHAEFHVEADLILACDGAYSAVRR 185


>Z75955-13|CAB00113.2|  424|Caenorhabditis elegans Hypothetical
           protein R07B7.4 protein.
          Length = 424

 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
 Frame = +3

Query: 303 GRSINLALSIRGRTALREVGLEDHMINNHGIPMKGRNIHRID--GSTYIIPYDSRTKQCI 476
           G+SINLAL +R  + ++ +GL++ +I + G+P++ +  H  D  G    +P        I
Sbjct: 4   GKSINLALGVRAMSTMKRIGLKEKVI-HIGVPIRDQIAHFGDTKGKLKRLPV-LNDDDFI 61

Query: 477 YSVGRNYLNGLLLQESEKYENVERFFNHKLIASNLRKGFLSFQKTDTKEIVEVNADLIIG 656
            ++ R  L+ +L+ E+EKY NV+  FN K    +L+   L  Q +D   +  V+ DL + 
Sbjct: 62  LTINRQELSQILINEAEKYNNVKFHFNCKATKFDLKSESLIVQNSD--NLSTVDGDLFLA 119

Query: 657 ADGAFSAVRK 686
            DGA S++R+
Sbjct: 120 CDGAHSSIRR 129


>AF016676-2|AAG24106.1|  500|Caenorhabditis elegans Cytochrome p450
           family protein 33C3 protein.
          Length = 500

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = +3

Query: 477 YSVGRNYLNGLLLQESEKYENVERFFNHKLIASNLRKGFLSFQKTD 614
           +S+GR    G  L   E +  V  FFNH  I+ +  +GF S  K+D
Sbjct: 432 FSIGRRQCPGEGLARMEIFLFVANFFNHYQISPS-SEGFPSIDKSD 476


>U41746-3|AAO25990.1|  429|Caenorhabditis elegans Aspartyl protease
           protein 2, isoformb protein.
          Length = 429

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 405 GRNIHRIDGSTYIIPYDSRTKQCIYSV 485
           G  ++ ID S  IIP    +  CIY++
Sbjct: 361 GNQVYNIDSSNTIIPLGDGSNNCIYAI 387


>U41746-2|AAO25989.1|  635|Caenorhabditis elegans Aspartyl protease
           protein 2, isoforma protein.
          Length = 635

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 405 GRNIHRIDGSTYIIPYDSRTKQCIYSV 485
           G  ++ ID S  IIP    +  CIY++
Sbjct: 567 GNQVYNIDSSNTIIPLGDGSNNCIYAI 593


>U97403-9|AAB52469.1|  389|Caenorhabditis elegans Hypothetical
           protein T10E9.1 protein.
          Length = 389

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 16/74 (21%), Positives = 35/74 (47%)
 Frame = +3

Query: 462 TKQCIYSVGRNYLNGLLLQESEKYENVERFFNHKLIASNLRKGFLSFQKTDTKEIVEVNA 641
           T +C   + ++  N ++++ S   +    F N     +N+  GFL+ + +D  E  E+N 
Sbjct: 82  TPECDTRISQSSKNDIIIEGSRPIDEAIAFLNRMCFQNNVVIGFLTVELSDNFE--ELNN 139

Query: 642 DLIIGADGAFSAVR 683
             +   D   S+++
Sbjct: 140 KFMETLDNMESSLK 153


>AF003384-6|AAB54238.2|  451|Caenorhabditis elegans Coenzyme q
           (ubiquinone) biosynthesisprotein 6 protein.
          Length = 451

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 26/114 (22%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
 Frame = +3

Query: 351 REVGLEDHMINNHGIPMKGRNIHRIDGSTYIIPYD-SRTKQCIYSVGRNYLNGLLLQESE 527
           +++G+ D  IN+H      R       ST  I ++  + ++  + +  + + G L ++  
Sbjct: 83  KKLGVWDQ-INSHRTKKVNRLFVFDSCSTSEIEFERGQQEEVAFIIENDLIVGSLYEKLA 141

Query: 528 KYENVERFFNHKLIASNLRKGF--LSFQKTDTKEIVEVNADLIIGADGAFSAVR 683
           +Y+NV+     K+   ++      ++  K +  +++E +  L+IGADG  S VR
Sbjct: 142 EYKNVDVKTGAKVEDCSIPNALENMATIKLENGDVIETS--LLIGADGVNSKVR 193


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,214,875
Number of Sequences: 27780
Number of extensions: 317223
Number of successful extensions: 696
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)