Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt21e03
(647 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66515-5|CAA91349.1| 219|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 29 3.8
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 29 3.8
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 5.0
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 5.0
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 5.0
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 5.0
Z77662-2|CAB01200.1| 181|Caenorhabditis elegans Hypothetical pr... 27 8.7
AC017117-1|AAF16618.1| 338|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z66515-5|CAA91349.1| 219|Caenorhabditis elegans Hypothetical
protein R53.5 protein.
Length = 219
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/151 (26%), Positives = 69/151 (45%)
Frame = +1
Query: 112 GTQKVRNVSSGEVLELKSFWEQQNVAIVFFRRWGCMFCRLWAKELSEIAPILKQHNIKLV 291
G ++ V E S +++ + ++ RR GCM CR A EL + P+LK+ I+L
Sbjct: 48 GPKEKEVVERNEQFTADSLFKKGPIMVMAVRRPGCMLCRREAAELHTLLPLLKEKGIELA 107
Query: 292 GVGVEEAGSKEFSEGKFFDGDLYYVENISTYQQLGFKRFNVLTILTSLLWKQSRDAISKG 471
V E G+ EF +F G Y++ T+ +R+ L + L + + K
Sbjct: 108 AVVHETRGANEFK--SWFSGGDVYLDTDRTFYGPN-ERW--LPVWMGFLRFGTYSNVYKA 162
Query: 472 KAMGLSGDMKGDWVQVGGAALVEKGGNLLRH 564
K + G+M+G+ +GG L+ + H
Sbjct: 163 KKAKVEGNMEGEGRLLGGVYLIANNDIVFTH 193
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 124 VRNVSSGEVLELKSFWEQQNVAIVFFRRWGCMFCRLWAKELSEIAP 261
V NV E+L ++NV +VF + C C L+ EL +AP
Sbjct: 64 VVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAP 109
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical
protein C11H1.4a protein.
Length = 996
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 124 VRNVSSGEVLELKSFWEQQNVAIVFFRRWGCMFCRLWAKELSEIAP 261
V NV E+L ++NV +VF + C C L+ EL +AP
Sbjct: 790 VVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAP 835
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +1
Query: 124 VRNVSSGEVLELKSFWEQQNVAIVFFRRWGCMFCRLWAKELSEIAP 261
V NV E+L ++NV +VF + C C L+ EL +AP
Sbjct: 790 VVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAP 835
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 348 IEKLSFAELLGSGLFDANPDKF 283
++KL+FAE LG GL D+ + F
Sbjct: 3022 VDKLNFAEALGKGLIDSKQNVF 3043
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 348 IEKLSFAELLGSGLFDANPDKF 283
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 348 IEKLSFAELLGSGLFDANPDKF 283
++KL+FAE LG GL D+ + F
Sbjct: 2920 VDKLNFAEALGKGLIDSKQNVF 2941
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 348 IEKLSFAELLGSGLFDANPDKF 283
++KL+FAE LG GL D+ + F
Sbjct: 2921 VDKLNFAEALGKGLIDSKQNVF 2942
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 348 IEKLSFAELLGSGLFDANPDKF 283
++KL+FAE LG GL D+ + F
Sbjct: 3003 VDKLNFAEALGKGLIDSKQNVF 3024
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 348 IEKLSFAELLGSGLFDANPDKF 283
++KL+FAE LG GL D+ + F
Sbjct: 3022 VDKLNFAEALGKGLIDSKQNVF 3043
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 348 IEKLSFAELLGSGLFDANPDKF 283
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 348 IEKLSFAELLGSGLFDANPDKF 283
++KL+FAE LG GL D+ + F
Sbjct: 2920 VDKLNFAEALGKGLIDSKQNVF 2941
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 348 IEKLSFAELLGSGLFDANPDKF 283
++KL+FAE LG GL D+ + F
Sbjct: 2921 VDKLNFAEALGKGLIDSKQNVF 2942
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 348 IEKLSFAELLGSGLFDANPDKF 283
++KL+FAE LG GL D+ + F
Sbjct: 3003 VDKLNFAEALGKGLIDSKQNVF 3024
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 348 IEKLSFAELLGSGLFDANPDKF 283
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 348 IEKLSFAELLGSGLFDANPDKF 283
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 348 IEKLSFAELLGSGLFDANPDKF 283
++KL+FAE LG GL D+ + F
Sbjct: 3034 VDKLNFAEALGKGLIDSKQNVF 3055
>Z77662-2|CAB01200.1| 181|Caenorhabditis elegans Hypothetical
protein F47B8.2 protein.
Length = 181
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 372 VLDVIQISIEKLSFAELLGSGLFDANPDKFDV 277
VL V+Q I + FA SGL D N F+V
Sbjct: 86 VLAVLQFMIWPVMFASFTASGLADTNKTMFEV 117
>AC017117-1|AAF16618.1| 338|Caenorhabditis elegans Hypothetical
protein F43C11.8 protein.
Length = 338
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 58 INHKSELKLKMSPDINQIGTQKVRNVSSGEVLELK 162
++ +L K+ +I +IGT ++ N+ GEV + K
Sbjct: 163 LSRSEDLASKIDANIEKIGTAQLTNLDDGEVFQEK 197
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,675,972
Number of Sequences: 27780
Number of extensions: 331414
Number of successful extensions: 1045
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1043
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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