Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21d24
         (341 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U31961-18|AAA84417.1|  642|Drosophila melanogaster protein ( Dro...    28   2.8  
AY119141-1|AAM51001.1|  411|Drosophila melanogaster RE44625p pro...    28   2.8  
AE014297-2248|AAF55347.1|  630|Drosophila melanogaster CG10328-P...    28   2.8  
AY089401-1|AAL90139.1|  267|Drosophila melanogaster AT22782p pro...    27   6.4  
AE014297-2039|AAF55194.3| 1559|Drosophila melanogaster CG31302-P...    27   6.4  
AE014134-2640|AAF53485.2|  261|Drosophila melanogaster CG31826-P...    27   6.4  

>U31961-18|AAA84417.1|  642|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 642

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 206 KHTRKYITDTKKKIFLEKTNKKCNQKCFF 292
           KHT + I +  KK       + CN+KCFF
Sbjct: 388 KHTGEGIVEFAKKSSASACLRLCNEKCFF 416


>AY119141-1|AAM51001.1|  411|Drosophila melanogaster RE44625p
           protein.
          Length = 411

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 206 KHTRKYITDTKKKIFLEKTNKKCNQKCFF 292
           KHT + I +  KK       + CN+KCFF
Sbjct: 157 KHTGEGIVEFAKKSSASACLRLCNEKCFF 185


>AE014297-2248|AAF55347.1|  630|Drosophila melanogaster CG10328-PA
           protein.
          Length = 630

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +2

Query: 206 KHTRKYITDTKKKIFLEKTNKKCNQKCFF 292
           KHT + I +  KK       + CN+KCFF
Sbjct: 376 KHTGEGIVEFAKKSSASACLRLCNEKCFF 404


>AY089401-1|AAL90139.1|  267|Drosophila melanogaster AT22782p
           protein.
          Length = 267

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -1

Query: 203 VSNIKRSVLQMHQRPVHILQRG 138
           V N K  VL   QR VHI+QRG
Sbjct: 168 VVNEKNGVLPFSQRIVHIIQRG 189


>AE014297-2039|AAF55194.3| 1559|Drosophila melanogaster CG31302-PB,
           isoform B protein.
          Length = 1559

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 16/56 (28%), Positives = 24/56 (42%)
 Frame = +3

Query: 9   LAPPSVVLAXIALPSKFVQKXEVYRGRVWTRLFLTATSENAPLPPLKDVNRPLVHL 176
           L P S+     +L S  +Q  +   G+      L+ TS    +PPL     PL+ L
Sbjct: 106 LVPNSISGISSSLSSHAIQSMQYGTGQTSVEKLLSGTSGITGIPPLPSTTMPLLSL 161


>AE014134-2640|AAF53485.2|  261|Drosophila melanogaster CG31826-PA
           protein.
          Length = 261

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -1

Query: 203 VSNIKRSVLQMHQRPVHILQRG 138
           V N K  VL   QR VHI+QRG
Sbjct: 161 VVNEKNGVLPFSQRIVHIIQRG 182


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,487,663
Number of Sequences: 53049
Number of extensions: 240216
Number of successful extensions: 666
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 666
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 798368334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)