Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmmt21d24
(341 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 23 1.3
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 2.4
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 2.4
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 2.4
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 2.4
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 2.4
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 2.4
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 2.4
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 2.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 2.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 2.4
DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex det... 21 3.1
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 5.4
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 5.4
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 5.4
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 7.2
DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein. 20 9.5
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 20 9.5
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 20 9.5
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 20 9.5
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 9.5
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 22.6 bits (46), Expect = 1.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +2
Query: 68 VXGIQRACLDPTLPYC 115
V G AC +P+L YC
Sbjct: 165 VTGKTTACFEPSLDYC 180
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 172 ICSTDRLIFDTQTYSKIYNRYEKKNF 249
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 172 ICSTDRLIFDTQTYSKIYNRYEKKNF 249
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 172 ICSTDRLIFDTQTYSKIYNRYEKKNF 249
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 172 ICSTDRLIFDTQTYSKIYNRYEKKNF 249
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 172 ICSTDRLIFDTQTYSKIYNRYEKKNF 249
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 172 ICSTDRLIFDTQTYSKIYNRYEKKNF 249
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 172 ICSTDRLIFDTQTYSKIYNRYEKKNF 249
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 2.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 172 ICSTDRLIFDTQTYSKIYNRYEKKNF 249
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNSLSNNYNYNNNYNNYNKHNY 106
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 2.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 172 ICSTDRLIFDTQTYSKIYNRYEKKNF 249
I S + + + Y+ YN Y K N+
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNY 339
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 2.4
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 172 ICSTDRLIFDTQTYSKIYNRYEKKNF 249
I S + + + Y+ YN Y K N+
Sbjct: 314 IISNNNSLSNNYNYNNNYNNYNKHNY 339
>DQ325133-1|ABD14147.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 3.1
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 172 ICSTDRLIFDTQTYSKIYNRYEKKNF 249
I S + + + Y+ YN Y K N+
Sbjct: 81 IISNNNPLSNNYNYNNNYNNYNKHNY 106
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.6 bits (41), Expect = 5.4
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 211 YSKIYNRYEKKNFFGKN 261
Y+ YN Y KK ++ N
Sbjct: 97 YNNNYNNYNKKLYYNIN 113
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.4
Identities = 9/25 (36%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 215 RKY--ITDTKKKIFLEKTNKKCNQK 283
R+Y + + K+K+ E+TN+K N +
Sbjct: 16 RRYEKLHNEKEKLLEERTNRKRNSR 40
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.6 bits (41), Expect = 5.4
Identities = 9/25 (36%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 215 RKY--ITDTKKKIFLEKTNKKCNQK 283
R+Y + + K+K+ E+TN+K N +
Sbjct: 16 RRYEKLHNEKEKLLEERTNRKRNSR 40
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.2 bits (40), Expect = 7.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 123 ENAPLPP 143
ENAPLPP
Sbjct: 1106 ENAPLPP 1112
>DQ435326-1|ABD92641.1| 132|Apis mellifera OBP9 protein.
Length = 132
Score = 19.8 bits (39), Expect = 9.5
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 263 NKKCNQKCFFT 295
N KC KCF T
Sbjct: 54 NLKCYLKCFMT 64
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = +1
Query: 196 FDTQTYSKIYNRYEKKNFF 252
++ Y YN Y KK ++
Sbjct: 324 YNNNNYKYNYNNYNKKLYY 342
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = -3
Query: 99 GSRHALCIPXTFVQTCLVVQXRQVLP 22
G + ALCI QT + +++P
Sbjct: 264 GEKIALCINILLSQTMFFLLISEIIP 289
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 19.8 bits (39), Expect = 9.5
Identities = 6/19 (31%), Positives = 10/19 (52%)
Frame = -2
Query: 232 ICYIFSSMFEYRILSGRCY 176
ICY+ + Y I +C+
Sbjct: 658 ICYLGKAYLMYAIAGSQCF 676
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 19.8 bits (39), Expect = 9.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 5 APCTTIGSTCLXCTTKQVCTKVXGIQ 82
+P T GS C TT ++ +V ++
Sbjct: 275 SPATPKGSKCSMITTPEIKKEVEDME 300
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,334
Number of Sequences: 438
Number of extensions: 1475
Number of successful extensions: 21
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7839909
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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