Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21d18
         (626 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-3366|AAF46825.1|  727|Drosophila melanogaster CG3382-PA...    29   6.8  
AY060941-1|AAL28489.1|  525|Drosophila melanogaster GM08242p pro...    28   9.0  
AE013599-802|AAF58980.1|  525|Drosophila melanogaster CG8058-PA ...    28   9.0  

>AE013599-3366|AAF46825.1|  727|Drosophila melanogaster CG3382-PA
           protein.
          Length = 727

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -2

Query: 262 LGFSTKAIYCIFNICVHIF-NDCKTTVRIKNNYKLVQSVYKALTIVYKN-SIC 110
           LG    AI+C+  +  HIF    +  +R+   Y + +S   +L I  KN S+C
Sbjct: 165 LGLIIIAIFCLLMLTPHIFYGPGEEALRLTEEYGMSESFGASLNITEKNDSLC 217


>AY060941-1|AAL28489.1|  525|Drosophila melanogaster GM08242p
           protein.
          Length = 525

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 621 CGLTRGPTTSKNLMSILN*SKLVLPPAKIRC 529
           C L RGPTT   L+   + ++L+ P   IRC
Sbjct: 3   CALVRGPTTDHKLVLYRSVAELLGPVHDIRC 33


>AE013599-802|AAF58980.1|  525|Drosophila melanogaster CG8058-PA
           protein.
          Length = 525

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 621 CGLTRGPTTSKNLMSILN*SKLVLPPAKIRC 529
           C L RGPTT   L+   + ++L+ P   IRC
Sbjct: 3   CALVRGPTTGHKLVLYRSVAELLGPVHDIRC 33


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,543,839
Number of Sequences: 53049
Number of extensions: 436257
Number of successful extensions: 653
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)