Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmmt21d06
         (634 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0201 - 20869057-20869361,20869506-20869922,20870184-20870544     29   2.3  
12_02_0994 + 25095991-25096003,25097183-25097236,25097605-250976...    28   5.4  

>02_04_0201 - 20869057-20869361,20869506-20869922,20870184-20870544
          Length = 360

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +3

Query: 270 SAGCRNNAQIH*PLLYISAYQLRDSSIIKKKIGYLVSFRNLRIY 401
           S+   NN +    L  +S Y+ + S  I +++GYLV+ +NL +Y
Sbjct: 211 SSSIPNNLENLTKLTVLSLYKNQLSGHIPQELGYLVNLKNLSLY 254


>12_02_0994 +
           25095991-25096003,25097183-25097236,25097605-25097687,
           25097825-25097884,25098871-25098958,25098999-25099067,
           25099283-25099335,25099829-25099909,25100517-25100629,
           25101393-25101555
          Length = 258

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -1

Query: 313 NKGQWICALLRHPALLKKMIIQ 248
           +K +W   +LRHP+LLK M +Q
Sbjct: 181 DKEEWRNLVLRHPSLLKNMTLQ 202


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,581,011
Number of Sequences: 37544
Number of extensions: 193026
Number of successful extensions: 296
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)